myRT

myRT report for GCA_002011985.1_ASM201198v1

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Seq: CP018956.1 Escherichia coli strain Ecol_316 plasmid pEC316_KPC, complete sequence (216226 bp)
Overview 1 RT 1: 14099-20718 bp Neighborhood of RT #1 [14099, 21608] P Q RVT-AbiP2 Phage_GPA Feature: gene Location: 14099-15871 bp Ori: AQV28346.1 Feature: domain Description: P Location: 14126-15857 bp Feature: domain Description: P Location: 1 41 26-1 5857 bp Feature: gene Location: 15871-16905 bp Ori: AQV28347.1 Feature: domain Description: Q Location: 15874-16897 bp Feature: domain Description: Q Location: 1 5874-1 6897 bp Feature: gene Location: 17300-18844 bp Ori: AQV28348.1 Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 17717-18170 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 1 771 7-1 81 70 bp Feature: gene Location: 19010-19228 bp Feature: gene Location: 19332-21608 bp Ori: AQV28349.1 Feature: domain Description: Phage_GPA Location: 19731-20718 bp Feature: domain Description: Phage_GPA Location: 1 9731 -2071 8 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT P (PHA02535), Q (PHA02536), RVT-AbiP2, Phage_GPA (pfam05840)

Seq: CP018957.1 Escherichia coli strain Ecol_316 chromosome, complete genome (5056072 bp)
Overview 1 RT 1: 2389038-2392137 bp Neighborhood of RT #1 [2389038, 2392137] YhhI YhhI YhhI RVT-GII GIIM YhhI Feature: gene Location: 2389038-2389994 bp Ori: AQV30819.1 Feature: domain Description: YhhI Location: 2389041-2389386 bp Feature: domain Description: YhhI Location: 2 389041-2 389386 bp Feature: domain Description: YhhI Location: 2389443-2389797 bp Feature: domain Description: YhhI Location: 2 389443-2 389797 bp Feature: domain Description: YhhI Location: 2389797-2389977 bp Feature: domain Description: YhhI Location: 2 389797-2 389977 bp Feature: gene Location: 2390215-2390502 bp Feature: gene Location: 2390526-2391776 bp Ori: AQV30821.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2390730-2391387 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 390730-2 391387 bp Feature: domain Description: GIIM Note: maturase Location: 2391468-2391690 bp Feature: domain Description: GIIM Note: maturase Location: 2 391468-2 391690 bp Feature: gene Location: 2391853-2392047 bp Feature: domain Description: YhhI Location: 2391862-2392033 bp Feature: domain Description: YhhI Location: 2 391862 -2 392 033 bp Feature: gene Location: 2392069-2392137 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YhhI (COG5433), RVT-GII, GIIM (pfam08388)

Seq: CP018955.1 Escherichia coli strain Ecol_316 plasmid pEC316_2, complete sequence (101186 bp)
Overview 1 RT 1: 59418-63619 bp Neighborhood of RT #1 [59418, 63636] Plasmid_stab_B Plasmid_stab_B StbA RVT-GII PRK10276 Feature: gene Location: 59418-60089 bp Ori: AQV28273.1 Feature: domain Description: Plasmid_stab_B Location: 59433-59640 bp Feature: domain Description: Plasmid_stab_B Location: 5943 3 -59640 bp Feature: domain Description: Plasmid_stab_B Location: 59745-59952 bp Feature: domain Description: Plasmid_stab_B Location: 59745-59952 bp Feature: gene Location: 60092-61063 bp Ori: AQV28274.1 Feature: domain Description: StbA Location: 60095-61040 bp Feature: domain Description: StbA Location: 60095-61040 bp Feature: gene Location: 61312-62796 bp Ori: AQV28275.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 61714-62404 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 61714-62404 bp Feature: gene Location: 62796-63047 bp Feature: gene Location: 63205-63636 bp Ori: AQV28277.1 Feature: domain Description: PRK10276 Location: 63253-63619 bp Feature: domain Description: PRK10276 Location: 63 253 -63 619 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Plasmid_stab_B (pfam10784), StbA (pfam06406), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)