myRT

myRT report for GCA_002012005.1_ASM201200v1

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Seq: CP018965.1 Escherichia coli strain Ecol_517 chromosome, complete genome (4794957 bp)
Overview 1 RT 1: 1455301-1459184 bp Neighborhood of RT #1 [1455301, 1459189] rph pyrE RVT-Retrons slmA dut Feature: gene Location: 1455301-1456017 bp Ori: AQV40238.1 Feature: domain Description: rph Location: 1455304-1456012 bp Feature: domain Description: rph Location: 1 455304-1 45601 2 bp Feature: gene Location: 1456084-1456725 bp Ori: AQV40239.1 Feature: domain Description: pyrE Location: 1456087-1456720 bp Feature: domain Description: pyrE Location: 1 456087-1 456720 bp Feature: gene Location: 1457023-1457982 bp Ori: AQV40240.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1457158-1457707 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 4571 58-1 457707 bp Feature: gene Location: 1458028-1458624 bp Ori: AQV40241.1 Feature: domain Description: slmA Location: 1458034-1458610 bp Feature: domain Description: slmA Location: 1 458034-1 45861 0 bp Feature: gene Location: 1458731-1459189 bp Ori: AQV40242.1 Feature: domain Description: dut Location: 1458737-1459184 bp Feature: domain Description: dut Location: 1 458737-1 4591 84 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT rph (PRK00173), pyrE (TIGR00336), RVT-Retrons, slmA (PRK09480), dut (TIGR00576)

Seq: CP018964.1 Escherichia coli strain Ecol_517 plasmid pEC517_1, complete sequence (118495 bp)
Overview 1 RT 1: 66097-69367 bp Neighborhood of RT #1 [66097, 69420] RVT-GII GIIM PHA02517 autotrans_barl Feature: gene Location: 66097-66348 bp Feature: gene Location: 66383-66808 bp Feature: gene Location: 66762-68285 bp Ori: AQV38831.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 67035-67767 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 67035-67767 bp Feature: domain Description: GIIM Note: maturase Location: 67842-68040 bp Feature: domain Description: GIIM Note: maturase Location: 67842 -68040 bp Feature: gene Location: 68360-68848 bp Ori: AQV38832.1 Feature: domain Description: PHA02517 Location: 68369-68846 bp Feature: domain Description: PHA02 517 Location: 68369-68846 bp Feature: gene Location: 68851-69420 bp Ori: AQV38896.1 Feature: domain Description: autotrans_barl Location: 68932-69367 bp Feature: domain Description: autotrans_barl Location: 68932 -69367 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed), autotrans_barl (TIGR01414)