myRT

myRT report for GCA_002012045.1_ASM201204v1

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Seq: CP018975.1 Escherichia coli strain Ecol_545 plasmid pEC545_1, complete sequence (95926 bp)
Overview 1 RT 1: 52227-56150 bp Neighborhood of RT #1 [52227, 56150] DUF905 PRK13732 RVT-GII Intron_maturas2 HNHc Feature: gene Location: 52227-52460 bp Ori: AQV49970.1 Feature: domain Description: DUF905 Location: 52257-52455 bp Feature: domain Description: DUF905 Location: 52257-52455 bp Feature: gene Location: 52518-53003 bp Ori: AQV49971.1 Feature: domain Description: PRK13732 Location: 52521-53001 bp Feature: domain Description: PRK1 3732 Location: 52521 -53001 bp Feature: gene Location: 53153-55054 bp Ori: AQV49972.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 53420-54251 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 53420-54251 bp Feature: domain Description: Intron_maturas2 Location: 54365-54623 bp Feature: domain Description: Intron_maturas2 Location: 54365-54623 bp Feature: domain Description: HNHc Note: nucleases Location: 54797-54959 bp Feature: domain Description: HNHc Note: nucleases Location: 54797-54959 bp Feature: gene Location: 55703-55909 bp Feature: gene Location: 56071-56150 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF905 (pfam06006), PRK13732 (single-stranded DNA-binding protein; Provisional), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: CP018976.1 Escherichia coli strain Ecol_545 chromosome, complete genome (5031843 bp)
Overview 1 RT 1: 2686258-2692367 bp Neighborhood of RT #1 [2686258, 2692426] AbiEii AbiEi_3_N AbiEi_3 RVT-UG5 nitrilase SfsB Feature: gene Location: 2686258-2687178 bp Ori: AQV52585.1 Feature: domain Description: AbiEii Location: 2686300-2687041 bp Feature: domain Description: AbiEii Location: 2 686300-2 687041 bp Feature: gene Location: 2687165-2687968 bp Ori: AQV52586.1 Feature: domain Description: AbiEi_3_N Location: 2687198-2687459 bp Feature: domain Description: AbiEi_3_N Location: 2 687198-2 687459 bp Feature: domain Description: AbiEi_3 Location: 2687471-2687927 bp Feature: domain Description: AbiEi_3 Location: 2 687471-2 68792 7 bp Feature: gene Location: 2688263-2691472 bp Ori: AQV52587.1 Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 2688791-2689280 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 2 688791-2 6892 80 bp Feature: domain Description: nitrilase Location: 2690786-2691383 bp Feature: domain Description: nitrilase Location: 2 690786-2 691383 bp Feature: gene Location: 2691819-2692289 bp Feature: gene Location: 2692286-2692426 bp Ori: AQV52589.1 Feature: domain Description: SfsB Location: 2692295-2692367 bp Feature: domain Description: SfsB Location: 2 692 2 95-2 692 367 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AbiEii (pfam08843), AbiEi_3_N (pfam17194), AbiEi_3 (pfam11459), RVT-UG5, nitrilase (cl11424), SfsB (COG3423)