myRT

myRT report for GCA_002012185.1_ASM201218v1

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Seq: CP018961.1 Escherichia coli strain Ecol_422 plasmid pEC422_1, complete sequence (289903 bp)
Overview 1 RT 1: 271997-276473 bp Neighborhood of RT #1 [271997, 276523] umuC PRK10276 RVT-GII InsQ Feature: gene Location: 271997-273268 bp Ori: AQV33991.1 Feature: domain Description: umuC Location: 272000-273260 bp Feature: domain Description: umuC Location: 272000-273260 bp Feature: gene Location: 273268-273690 bp Ori: AQV33992.1 Feature: domain Description: PRK10276 Location: 273274-273676 bp Feature: domain Description: PRK1 0276 Location: 273274-273676 bp Feature: gene Location: 273776-275260 bp Ori: AQV33993.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 274178-274868 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2741 78-274868 bp Feature: gene Location: 275393-275644 bp Feature: gene Location: 275954-276523 bp Feature: domain Description: InsQ Location: 275963-276473 bp Feature: domain Description: InsQ Location: 275963-276473 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, InsQ (COG0675)

Seq: CP018962.1 Escherichia coli strain Ecol_422 chromosome, complete genome (4747607 bp)
Overview 1 RT 1: 2251262-2254338 bp 2 RT 2: 3917342-3920360 bp Neighborhood of RT #1 [2251262, 2254338] SH3_2 SH3_2 PHA02517 RVT-GII GIIM Neighborhood of RT #2 [3917342, 3920470] RVT-GII GIIM PHA02517 Ogr_Delta Feature: gene Location: 2251262-2251544 bp Feature: domain Description: SH3_2 Location: 2251277-2251340 bp Feature: domain Description: SH3_2 Location: 2 2 512 77-2 2 51340 bp Feature: domain Description: SH3_2 Location: 2251370-2251487 bp Feature: domain Description: SH3_2 Location: 2 2 51370-2 2 51487 bp Feature: gene Location: 2251587-2252075 bp Ori: AQV36157.1 Feature: domain Description: PHA02517 Location: 2251596-2252073 bp Feature: domain Description: PHA02 517 Location: 2 2 51596-2 2 52 073 bp Feature: gene Location: 2252150-2253673 bp Ori: AQV36158.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2252423-2253155 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 2 52 42 3-2 2 53155 bp Feature: domain Description: GIIM Note: maturase Location: 2253230-2253428 bp Feature: domain Description: GIIM Note: maturase Location: 2 2 532 30-2 2 5342 8 bp Feature: gene Location: 2253627-2254052 bp Feature: gene Location: 2254087-2254338 bp Feature: gene Location: 3917342-3917590 bp Feature: gene Location: 3917625-3918050 bp Feature: gene Location: 3918004-3919527 bp Ori: AQV37757.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3918277-3919009 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 39182 77-3919009 bp Feature: domain Description: GIIM Note: maturase Location: 3919084-3919282 bp Feature: domain Description: GIIM Note: maturase Location: 3919084-39192 82 bp Feature: gene Location: 3919602-3920096 bp Ori: AQV37758.1 Feature: domain Description: PHA02517 Location: 3919611-3920085 bp Feature: domain Description: PHA02 517 Location: 3919611-392 0085 bp Feature: gene Location: 3920210-3920470 bp Ori: AQV37759.1 Feature: domain Description: Ogr_Delta Location: 3920219-3920360 bp Feature: domain Description: Ogr_Delta Location: 392 02 19-392 0360 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SH3_2 (pfam07653), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), Ogr_Delta (pfam04606)