myRT

myRT report for GCA_002012305.1_ASM201230v1

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Seq: CP019017.1 Escherichia coli strain Ecol_244 plasmid pEC244_KPC, complete sequence (73464 bp)
Overview 1 RT 1: 67647-71121 bp Neighborhood of RT #1 [67647, 71138] Rep_3 DDE_Tnp_IS1 RVT-GII PRK10276 Feature: gene Location: 67647-67955 bp Feature: domain Description: Rep_3 Location: 67653-67917 bp Feature: domain Description: Rep_3 Location: 67653-6791 7 bp Feature: gene Location: 67965-68468 bp Ori: AQW15225.1 Feature: domain Description: DDE_Tnp_IS1 Location: 68076-68466 bp Feature: domain Description: DDE_Tnp_IS1 Location: 68076-68466 bp Feature: gene Location: 68814-70298 bp Ori: AQW15226.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 69216-69906 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6921 6-69906 bp Feature: gene Location: 70298-70549 bp Feature: gene Location: 70707-71138 bp Ori: AQW15228.1 Feature: domain Description: PRK10276 Location: 70758-71121 bp Feature: domain Description: PRK1 0276 Location: 70758-71 1 21 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Rep_3 (pfam01051), DDE_Tnp_IS1 (pfam03400), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)

Seq: CP019020.1 Escherichia coli strain Ecol_244 chromosome, complete genome (4913259 bp)
Overview 1 RT 1: 2258995-2263893 bp 2 RT 2: 3234957-3243640 bp Neighborhood of RT #1 [2258995, 2263893] RVT-Retrons Neighborhood of RT #2 [3234957, 3243640] DUF4011 DEXXQc_SF1 SF1_C_Upf1 MTES_1575 PHA02517 RVT-GII GIIM Feature: gene Location: 2258995-2259510 bp Feature: gene Location: 2259507-2260634 bp Feature: gene Location: 2260881-2262638 bp Ori: AQW17805.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2261025-2261643 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2 2 6102 5-2 2 61643 bp Feature: gene Location: 2263209-2263448 bp Feature: gene Location: 2263663-2263893 bp Feature: gene Location: 3234957-3240692 bp Ori: AQW18726.1 Feature: domain Description: DUF4011 Location: 3235047-3235881 bp Feature: domain Description: DUF4011 Location: 32 35047-32 35881 bp Feature: domain Description: DEXXQc_SF1 Location: 3236238-3239340 bp Feature: domain Description: DEXXQc_SF1 Location: 32 362 38-32 39340 bp Feature: domain Description: SF1_C_Upf1 Location: 3239349-3239877 bp Feature: domain Description: SF1_C_Upf1 Location: 32 39349-32 39877 bp Feature: domain Description: MTES_1575 Location: 3240006-3240297 bp Feature: domain Description: MTES_1575 Location: 32 40006-32 402 97 bp Feature: gene Location: 3240913-3241377 bp Ori: AQW18727.1 Feature: domain Description: PHA02517 Location: 3240922-3241369 bp Feature: domain Description: PHA02 517 Location: 32 4092 2 -32 41369 bp Feature: gene Location: 3241452-3242975 bp Ori: AQW18728.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3241725-3242457 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32 4172 5-32 42 457 bp Feature: domain Description: GIIM Note: maturase Location: 3242532-3242730 bp Feature: domain Description: GIIM Note: maturase Location: 32 42 532 -32 42 730 bp Feature: gene Location: 3242929-3243354 bp Feature: gene Location: 3243389-3243640 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, DUF4011 (pfam13195), DEXXQc_SF1 (cd18043), SF1_C_Upf1 (cd18808), MTES_1575 (pfam18741), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)