myRT

myRT report for GCA_002021875.1_ASM202187v1

Download annotations/find similar RTs

Seq: CP018627.1 Streptomyces hygroscopicus strain XM201, complete genome (12012215 bp)
Overview 1 RT 1: 94348-99861 bp 2 RT 2: 2335534-2342399 bp 3 RT 3: 11605053-11609000 bp 4 RT 4: 11777417-11781955 bp Neighborhood of RT #1 [94348, 99861] IS285 RVT-GII Neighborhood of RT #2 [2335534, 2342425] DDE_Tnp_1_2 RVT-GII GIIM WD40 RVT-GII GIIM DDE_Tnp_1 DDE_Tnp_1 Neighborhood of RT #3 [11605053, 11609098] MFS_MMR_MDR_like Isochorismatase RVT-GII GIIM DDE_3 Neighborhood of RT #4 [11777417, 11781996] group_II_RT_mat RVT-GII ABATE zf-CGNR RhaT Feature: gene Location: 94348-94980 bp Feature: gene Location: 95262-96554 bp Ori: AQW46623.1 Feature: domain Description: IS285 Location: 95370-96540 bp Feature: domain Description: IS285 Location: 95370-96540 bp Feature: gene Location: 96593-97180 bp Ori: AQW46624.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 96854-97175 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 96854-971 75 bp Feature: gene Location: 97765-99450 bp Feature: gene Location: 99625-99861 bp Feature: gene Location: 2335534-2335746 bp Feature: gene Location: 2335792-2336403 bp Ori: AQW48350.1 Feature: domain Description: DDE_Tnp_1_2 Location: 2336101-2336389 bp Feature: domain Description: DDE_Tnp_1 _2 Location: 23361 01 -2336389 bp Feature: gene Location: 2337671-2337940 bp Ori: AQW48351.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2337689-2337851 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2337689-2337851 bp Feature: gene Location: 2337971-2338399 bp Ori: AQW48352.1 Feature: domain Description: GIIM Note: maturase Location: 2337977-2338202 bp Feature: domain Description: GIIM Note: maturase Location: 2337977-2338202 bp Feature: gene Location: 2338549-2338902 bp Feature: gene Location: 2339293-2340240 bp Ori: AQW48354.1 Feature: domain Description: WD40 Location: 2339515-2340223 bp Feature: domain Description: WD40 Location: 233951 5-2340223 bp Feature: gene Location: 2340619-2341104 bp Ori: AQW48355.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2340631-2340727 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2340631 -2340727 bp Feature: domain Description: GIIM Note: maturase Location: 2340802-2341021 bp Feature: domain Description: GIIM Note: maturase Location: 2340802-2341 021 bp Feature: gene Location: 2341685-2341981 bp Ori: AQW48356.1 Feature: domain Description: DDE_Tnp_1 Location: 2341694-2341910 bp Feature: domain Description: DDE_Tnp_1 Location: 2341 694-2341 91 0 bp Feature: gene Location: 2342024-2342425 bp Ori: AQW48357.1 Feature: domain Description: DDE_Tnp_1 Location: 2342030-2342399 bp Feature: domain Description: DDE_Tnp_1 Location: 2342030-2342399 bp Feature: gene Location: 11605053-11606459 bp Ori: AQW56191.1 Feature: domain Description: MFS_MMR_MDR_like Location: 11605137-11606373 bp Feature: domain Description: MFS_MMR_MDR_like Location: 1 1 6051 37-1 1 606373 bp Feature: gene Location: 11606495-11607049 bp Ori: AQW56192.1 Feature: domain Description: Isochorismatase Location: 11606525-11607026 bp Feature: domain Description: Isochorismatase Location: 1 1 606525-1 1 607026 bp Feature: gene Location: 11607360-11607956 bp Ori: AQW56193.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11607624-11607837 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 607624-1 1 607837 bp Feature: gene Location: 11608408-11608701 bp Ori: AQW56194.1 Feature: domain Description: GIIM Note: maturase Location: 11608438-11608579 bp Feature: domain Description: GIIM Note: maturase Location: 1 1 608438-1 1 608579 bp Feature: gene Location: 11608853-11609098 bp Ori: AQW56195.1 Feature: domain Description: DDE_3 Location: 11608877-11609000 bp Feature: domain Description: DDE_3 Location: 1 1 608877-1 1 609000 bp Feature: gene Location: 11777417-11777914 bp Feature: gene Location: 11778846-11779121 bp Ori: AQW56364.1 Feature: domain Description: group_II_RT_mat Note: maturase Location: 11778897-11779071 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 1 1 778897-1 1 779071 bp Feature: gene Location: 11779220-11779972 bp Ori: AQW56365.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11779223-11779673 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 779223-1 1 779673 bp Feature: gene Location: 11780304-11780858 bp Ori: AQW56366.1 Feature: domain Description: ABATE Location: 11780340-11780655 bp Feature: domain Description: ABATE Location: 1 1 780340-1 1 780655 bp Feature: domain Description: zf-CGNR Location: 11780721-11780850 bp Feature: domain Description: zf-CGNR Location: 1 1 780721 -1 1 780850 bp Feature: gene Location: 11781016-11781996 bp Ori: AQW56367.1 Feature: domain Description: RhaT Location: 11781094-11781955 bp Feature: domain Description: RhaT Location: 1 1 781 094-1 1 781 955 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT IS285 (COG3328), RVT-GII, DDE_Tnp_1_2 (pfam13586), GIIM (pfam08388), WD40 (smart00320), DDE_Tnp_1 (pfam01609), MFS_MMR_MDR_like (cd17504), Isochorismatase (pfam00857), DDE_3 (pfam13358), group_II_RT_mat (TIGR04416)
ABATE (pfam07336), zf-CGNR (pfam11706), RhaT (TIGR00776)