myRT report for GCA_002024285.1_ASM202428v1
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Seq: CP019730.1 Pseudomonas syringae pv. actinidiae strain CRAFRU 12.29 chromosome, complete genome (6545549 bp)
Associated domains:myRT
| PLN02278 (succinic semialdehyde dehydrogenase) | , IS285 (COG3328) | , RVT-GII | , GIIM (pfam08388) | , GDH_like_2 (cd12164) | , GabT (COG0160) | , UvrD_C (pfam13361) | , RVT-UG9 | , HTH_28 (pfam13518) | , DDE_3 (pfam13358) |
upstrm_HI1419 (TIGR02683), Tra5 (COG2801) | , COG3666 (Transposase ) | , DDE_Tnp_1_6 (pfam13751) | , RVT-Retrons | , ComA-like_MBL-fold (cd07731) | , trans_reg_C (cd00383) | , PRK10756 (protein CreA) | , TnpB_IS66 (pfam05717) | , LZ_Tnp_IS66 (pfam13007) |
zf-IS66 (pfam13005), DDE_Tnp_IS66 (pfam03050) | , DDE_Tnp_IS66_C (pfam13817) | , CbiG (COG2073) | , CobJ (COG1010) | , PRK11240 (penicillin-binding protein 1C; Provisional) | , YfaS (COG2373) | , MltB (TIGR02282) | , PG_binding_1 (pfam01471) | , ArfA (COG3036) |
PRK05693 (SDR family oxidoreductase), LbH_gamma_CA_like (cd04645) | , YdhL (COG3313) | , YhhQ (COG1738) | , Hpt (pfam01627) | , FliK (COG3144) | , PRK12467 (peptide synthase; Provisional) | , A_NRPS (cd05930) | , FhuE (COG4773) | , PRK10378 (inactive ferrous ion transporter periplasmic protein EfeO; Provisional) |
tat_substr_1 (TIGR01412), solA (PRK11259) | , ALDH_KGSADH (cd07129) | , HTH_Tnp_1 (pfam01527) | , YdhU (COG4117) | , TAT_signal (pfam10518) | , bact_SO_family_Moco (cd02108) | , PRK09257 (aromatic amino acid transaminase) | , PRK05298 (excinuclease ABC subunit UvrB) | , gltX (PRK14895) |
IstB_IS21 (pfam01695), NERD (pfam08378) | , DEXXQc_Upf1-like (cd17934) | , TauA (COG4521) | , CHASE3 (pfam05227) | , Tar (COG0840) | , PBP1_rhizopine_binding_like | , PQQ_membr_DH (TIGR03074) | , GltS_FMN (cd02808) | , SsuD (COG2141) |
GT_2_like_f (cd04182), RutF (TIGR03615) | , PRK13968 (putative succinate semialdehyde dehydrogenase; Provisional) | , PGM_like3 (cd05801) | , PRK11778 (putative inner membrane peptidase; Provisional) | , COG3749 (Uncharacterized conserved protein, DUF934 family ) | , Hemerythrin (TIGR00058) | , PBP2_Mlr3796_like (cd13695) | , HisM (COG0765) | , Tas (COG0667) |
OprD (pfam03573), PRK11551 (putative 3-hydroxyphenylpropionic transporter MhpT; Provisional) | , modC_ABC (TIGR02142) | , Top1 (COG3569) | , Intron_maturas2 (pfam01348) | , HNHc (smart00507) | , DUF2625 (pfam10946) | , ligand_gated_channel (cd01347) | , ALDH_CddD_SSP0762 (cd07138) | , PRK10260 (L,D-transpeptidase; Provisional) |
PRK00153 (YbaB/EbfC family nucleoid-associated protein), PRK07994 (DNA polymerase III subunits gamma and tau; Validated) | , Tsx (COG3248) | , MutK (COG2354) | , efflux_EmrB (TIGR00711) | , DDE_Tnp_1 (pfam01609) | , YfeH (COG0385) | , PRK06814 (acyl---phospholipid O-acyltransferase) | , MFS_spinster_like (cd17328) | , AtoC (COG2204) |
TrHb1_N (cd00454), urea_degr_1 (TIGR03424) | , urea_carbox (TIGR02712) | , PRK08186 (allophanate hydrolase; Provisional) | , RfbB (COG1088) | , pgi (PRK14097) | , COG3662 (Uncharacterized conserved protein, DUF2236 family ) | , PRK05656 (acetyl-CoA C-acetyltransferase) | , PRK05321 (nicotinate phosphoribosyltransferase; Provisional) | , nadE (TIGR00552) |
COG3241 (Azurin ), YebA (COG1305) | , DUF2269 (pfam10027) | , RlmJ (COG2961) | , GAF (smart00065) | , PAS (smart00091) | , PRK10060 (cyclic di-GMP phosphodiesterase) | , PRK00058 (peptide-methionine (S)-S-oxide reductase MsrA) | , PRK12483 (threonine dehydratase; Reviewed) | , PRK00702 (ribose-5-phosphate isomerase RpiA) |
PAAR_motif (pfam05488)
