myRT

myRT report for GCA_002024845.1_ASM202484v1

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Seq: CP019723.1 Lactobacillus plantarum strain CLP0611 plasmid pUnnamed, complete sequence (33032 bp)
Overview 1 RT 1: 10960-14863 bp Neighborhood of RT #1 [10960, 14943] PRK09564 RVT-GII GIIM DDE_Tnp_Tn3 HTH_ARSR Feature: gene Location: 10960-11346 bp Feature: gene Location: 11478-12842 bp Ori: AQX95127.1 Feature: domain Description: PRK09564 Location: 11493-12816 bp Feature: domain Description: PRK09564 Location: 1 1 493-1 281 6 bp Feature: gene Location: 12977-13879 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12992-13433 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 2992-1 3433 bp Feature: domain Description: GIIM Note: maturase Location: 13487-13715 bp Feature: domain Description: GIIM Note: maturase Location: 1 3487-1 371 5 bp Feature: gene Location: 14043-14384 bp Feature: domain Description: DDE_Tnp_Tn3 Location: 14049-14316 bp Feature: domain Description: DDE_Tnp_Tn3 Location: 1 4049-1 431 6 bp Feature: gene Location: 14620-14943 bp Ori: AQX95128.1 Feature: domain Description: HTH_ARSR Location: 14650-14863 bp Feature: domain Description: HTH_ARSR Location: 1 4650-1 4863 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09564 (coenzyme A disulfide reductase; Reviewed), RVT-GII, GIIM (pfam08388), DDE_Tnp_Tn3 (pfam01526), HTH_ARSR (smart00418)

Seq: CP019722.1 Lactobacillus plantarum strain CLP0611 chromosome, complete genome (3197722 bp)
Overview 1 RT 1: 2780764-2785721 bp Neighborhood of RT #1 [2780764, 2785852] gpmA RVT-Retrons Phage_int_SAM_5 INT_ICEBs1_C_like COG4333 Feature: gene Location: 2780764-2780991 bp Ori: AQX94682.1 Feature: domain Description: gpmA Location: 2780779-2780983 bp Feature: domain Description: gpmA Location: 2 780779-2 780983 bp Feature: gene Location: 2781269-2782219 bp Feature: gene Location: 2782325-2783269 bp Ori: AQX94684.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2782454-2783000 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2 782 454-2 783000 bp Feature: gene Location: 2784103-2785233 bp Ori: AQX94685.1 Feature: domain Description: Phage_int_SAM_5 Location: 2784292-2784550 bp Feature: domain Description: Phage_int_SAM_5 Location: 2 7842 92 -2 784550 bp Feature: domain Description: INT_ICEBs1_C_like Location: 2784670-2785171 bp Feature: domain Description: INT_ICEBs1_C_like Location: 2 784670-2 785171 bp Feature: gene Location: 2785226-2785852 bp Ori: AQX94686.1 Feature: domain Description: COG4333 Location: 2785292-2785721 bp Feature: domain Description: COG4333 Location: 2 7852 92 -2 78572 1 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT gpmA (PRK14120), RVT-Retrons, Phage_int_SAM_5 (pfam13102), INT_ICEBs1_C_like (cd01189), COG4333 (Uncharacterized protein )