myRT

myRT report for GCA_002025025.1_ASM202502v1

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Seq: CP019978.1 Streptococcus agalactiae strain Sag37 chromosome, complete genome (2198785 bp)
Overview 1 RT 1: 649215-659384 bp 2 RT 2: 1914320-1917569 bp Neighborhood of RT #1 [649215, 659384] N6_Mtase COG4646 RVT-GII Intron_maturas2 HNHc KOG1000 Neighborhood of RT #2 [1914320, 1917569] HTH_XRE RVT-GII GIIM PRK07275 PRK07275 Feature: gene Location: 649215-649766 bp Feature: gene Location: 649816-655257 bp Ori: AQY23903.1 Feature: domain Description: N6_Mtase Location: 651808-652399 bp Feature: domain Description: N6_Mtase Location: 651 808-652399 bp Feature: domain Description: COG4646 Location: 652993-655114 bp Feature: domain Description: COG4646 Location: 652993-6551 1 4 bp Feature: gene Location: 655755-657533 bp Ori: AQY23904.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 656016-656808 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 65601 6-656808 bp Feature: domain Description: Intron_maturas2 Location: 656913-657144 bp Feature: domain Description: Intron_maturas2 Location: 65691 3-6571 44 bp Feature: domain Description: HNHc Note: nucleases Location: 657309-657495 bp Feature: domain Description: HNHc Note: nucleases Location: 657309-657495 bp Feature: gene Location: 657671-659014 bp Ori: AQY23905.1 Feature: domain Description: KOG1000 Location: 657950-658265 bp Feature: domain Description: KOG1 000 Location: 657950-658265 bp Feature: gene Location: 659085-659384 bp Feature: gene Location: 1914320-1914679 bp Ori: AQY25055.1 Feature: domain Description: HTH_XRE Location: 1914344-1914506 bp Feature: domain Description: HTH_XRE Location: 1 91 4344-1 91 4506 bp Feature: gene Location: 1914664-1914924 bp Feature: gene Location: 1915057-1916376 bp Ori: AQY25057.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1915357-1915990 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 91 5357-1 91 5990 bp Feature: domain Description: GIIM Note: maturase Location: 1916059-1916281 bp Feature: domain Description: GIIM Note: maturase Location: 1 91 6059-1 91 6281 bp Feature: gene Location: 1916957-1917373 bp Ori: AQY25058.1 Feature: domain Description: PRK07275 Location: 1916960-1917296 bp Feature: domain Description: PRK07275 Location: 1 91 6960-1 91 7296 bp Feature: domain Description: PRK07275 Location: 1917323-1917371 bp Feature: domain Description: PRK07275 Location: 1 91 7323-1 91 7371 bp Feature: gene Location: 1917363-1917569 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT N6_Mtase (pfam02384), COG4646 (Adenine-specific DNA methylase, N12 class ), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), KOG1000 (KOG1000, Chromatin remodeling protein HARP/SMARCAL1, DEAD-box superfamily ), HTH_XRE (smart00530), GIIM (pfam08388), PRK07275 (single-stranded DNA-binding protein; Provisional)