myRT

myRT report for GCA_002025045.1_ASM202504v1

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Seq: CP019992.1 Enterococcus faecium isolate 2014-VREF-268 chromosome, complete genome (2990310 bp)
Overview 1 RT 1: 1005370-1010111 bp 2 RT 2: 2860755-2865493 bp Neighborhood of RT #1 [1005370, 1010188] ArdA RVT-GII HNHc DUF3789 HTH_XRE Rol_Rep_N Rep_trans Neighborhood of RT #2 [2860755, 2865570] ArdA RVT-GII HNHc DUF3789 HTH_XRE Rol_Rep_N Rep_trans Feature: gene Location: 1005370-1005873 bp Ori: AQY31427.1 Feature: domain Description: ArdA Location: 1005388-1005859 bp Feature: domain Description: ArdA Location: 1 005388-1 005859 bp Feature: gene Location: 1005886-1006110 bp Feature: gene Location: 1006214-1008124 bp Ori: AQY31429.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1006547-1007285 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 006547-1 007285 bp Feature: domain Description: HNHc Note: nucleases Location: 1007840-1008005 bp Feature: domain Description: HNHc Note: nucleases Location: 1 007840-1 008005 bp Feature: gene Location: 1008870-1008989 bp Ori: AQY31430.1 Feature: domain Description: DUF3789 Location: 1008879-1008972 bp Feature: domain Description: DUF3789 Location: 1 008879-1 008972 bp Feature: gene Location: 1009004-1010188 bp Ori: AQY31431.1 Feature: domain Description: HTH_XRE Location: 1009034-1009178 bp Feature: domain Description: HTH_XRE Location: 1 009034-1 0091 78 bp Feature: domain Description: Rol_Rep_N Location: 1009211-1009475 bp Feature: domain Description: Rol_Rep_N Location: 1 00921 1 -1 009475 bp Feature: domain Description: Rep_trans Location: 1009499-1010111 bp Feature: domain Description: Rep_trans Location: 1 009499-1 01 01 1 1 bp Feature: gene Location: 2860755-2861255 bp Ori: AQY33115.1 Feature: domain Description: ArdA Location: 2860773-2861244 bp Feature: domain Description: ArdA Location: 2860773-2861 244 bp Feature: gene Location: 2861268-2861492 bp Feature: gene Location: 2861596-2863506 bp Ori: AQY33117.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2861929-2862667 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2861 929-2862667 bp Feature: domain Description: HNHc Note: nucleases Location: 2863222-2863387 bp Feature: domain Description: HNHc Note: nucleases Location: 2863222-2863387 bp Feature: gene Location: 2864252-2864371 bp Ori: AQY33118.1 Feature: domain Description: DUF3789 Location: 2864261-2864354 bp Feature: domain Description: DUF3789 Location: 2864261 -2864354 bp Feature: gene Location: 2864386-2865570 bp Ori: AQY33119.1 Feature: domain Description: HTH_XRE Location: 2864416-2864560 bp Feature: domain Description: HTH_XRE Location: 286441 6-2864560 bp Feature: domain Description: Rol_Rep_N Location: 2864593-2864857 bp Feature: domain Description: Rol_Rep_N Location: 2864593-2864857 bp Feature: domain Description: Rep_trans Location: 2864881-2865493 bp Feature: domain Description: Rep_trans Location: 2864881 -2865493 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ArdA (pfam07275), RVT-GII, HNHc (smart00507), DUF3789 (pfam12664), HTH_XRE (smart00530), Rol_Rep_N (pfam18106), Rep_trans (pfam02486)