myRT

myRT report for GCA_002028325.1_ASM202832v1

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Seq: CP018420.1 Pseudomonas veronii strain R02 chromosome, complete genome (6852809 bp)
Overview 1 RT 1: 335092-339243 bp 2 RT 2: 858308-862069 bp 3 RT 3: 2387327-2395396 bp Neighborhood of RT #1 [335092, 339243] AcrR HTH_XRE RVT-Retrons Neighborhood of RT #2 [858308, 862962] RVT-Retrons Smc PRK07078 DUF927 Neighborhood of RT #3 [2387327, 2395396] AAA_13 AAA_13 RVT-Retrons HTH_MARR Feature: gene Location: 335092-335661 bp Ori: AQY63773.1 Feature: domain Description: AcrR Location: 335104-335605 bp Feature: domain Description: AcrR Location: 3351 04-335605 bp Feature: gene Location: 336630-336956 bp Ori: AQY63774.1 Feature: domain Description: HTH_XRE Location: 336639-336804 bp Feature: domain Description: HTH_XRE Location: 336639-336804 bp Feature: gene Location: 337018-337899 bp Ori: AQY63775.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 337126-337645 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3371 26-337645 bp Feature: gene Location: 338081-338836 bp Feature: gene Location: 338968-339243 bp Feature: gene Location: 858308-859087 bp Ori: AQY69391.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 858314-858812 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 85831 4-85881 2 bp Feature: gene Location: 859126-859983 bp Ori: AQY64188.1 Feature: domain Description: Smc Location: 859135-859819 bp Feature: domain Description: Smc Location: 8591 35-85981 9 bp Feature: gene Location: 860074-862962 bp Ori: AQY64189.1 Feature: domain Description: PRK07078 Location: 860119-861133 bp Feature: domain Description: PRK07078 Location: 8601 1 9-861 1 33 bp Feature: domain Description: DUF927 Location: 861232-862069 bp Feature: domain Description: DUF927 Location: 861 232-862069 bp Feature: gene Location: 2387327-2388532 bp Feature: gene Location: 2389028-2391622 bp Ori: AQY65570.1 Feature: domain Description: AAA_13 Location: 2389334-2389436 bp Feature: domain Description: AAA_1 3 Location: 2389334-2389436 bp Feature: domain Description: AAA_13 Location: 2390180-2391116 bp Feature: domain Description: AAA_1 3 Location: 23901 80-2391 1 1 6 bp Feature: gene Location: 2392251-2393417 bp Ori: AQY65571.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2392512-2393154 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 239251 2-23931 54 bp Feature: gene Location: 2393607-2394908 bp Ori: AQY65572.1 Feature: domain Description: HTH_MARR Location: 2394630-2394792 bp Feature: domain Description: HTH_MARR Location: 2394630-2394792 bp Feature: gene Location: 2395169-2395396 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AcrR (COG1309), HTH_XRE (smart00530), RVT-Retrons, Smc (COG1196), PRK07078 (hypothetical protein; Validated), DUF927 (pfam06048), AAA_13 (pfam13166), HTH_MARR (smart00347)