myRT

myRT report for GCA_002056145.1_ASM205614v1

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Seq: CP020055.1 Escherichia coli strain AR_0069, complete genome (4658583 bp)
Overview 1 RT 1: 194970-199567 bp 2 RT 2: 1967069-1970951 bp Neighborhood of RT #1 [194970, 199567] LysM IAT_beta PRK15318 Invasin_D3 PHA02517 RVT-GII GIIM Neighborhood of RT #2 [1967069, 1970956] dut slmA RVT-Retrons pyrE rph Feature: gene Location: 194970-196820 bp Ori: ARA29780.1 Feature: domain Description: LysM Location: 195183-195321 bp Feature: domain Description: LysM Location: 1 951 83-1 95321 bp Feature: domain Description: IAT_beta Location: 195402-196227 bp Feature: domain Description: IAT_beta Location: 1 95402-1 96227 bp Feature: domain Description: PRK15318 Location: 196428-196551 bp Feature: domain Description: PRK1 531 8 Location: 1 96428-1 96551 bp Feature: domain Description: Invasin_D3 Location: 196566-196803 bp Feature: domain Description: Invasin_D3 Location: 1 96566-1 96803 bp Feature: gene Location: 196822-197304 bp Ori: ARA29781.1 Feature: domain Description: PHA02517 Location: 196831-197296 bp Feature: domain Description: PHA0251 7 Location: 1 96831 -1 97296 bp Feature: gene Location: 197379-198902 bp Ori: ARA29782.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 197652-198384 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 97652-1 98384 bp Feature: domain Description: GIIM Note: maturase Location: 198459-198657 bp Feature: domain Description: GIIM Note: maturase Location: 1 98459-1 98657 bp Feature: gene Location: 198856-199281 bp Feature: gene Location: 199316-199567 bp Feature: gene Location: 1967069-1967527 bp Ori: ARA31432.1 Feature: domain Description: dut Location: 1967075-1967522 bp Feature: domain Description: dut Location: 1 967075-1 967522 bp Feature: gene Location: 1967634-1968230 bp Ori: ARA31433.1 Feature: domain Description: slmA Location: 1967640-1968216 bp Feature: domain Description: slmA Location: 1 967640-1 96821 6 bp Feature: gene Location: 1968276-1969235 bp Ori: ARA31434.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1968411-1968960 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 96841 1 -1 968960 bp Feature: gene Location: 1969533-1970174 bp Ori: ARA31435.1 Feature: domain Description: pyrE Location: 1969536-1970169 bp Feature: domain Description: pyrE Location: 1 969536-1 9701 69 bp Feature: gene Location: 1970240-1970956 bp Ori: ARA31436.1 Feature: domain Description: rph Location: 1970243-1970951 bp Feature: domain Description: rph Location: 1 970243-1 970951 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT LysM (smart00257), IAT_beta (pfam11924), PRK15318 (intimin-like protein SinH; Provisional), Invasin_D3 (pfam09134), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), dut (TIGR00576), slmA (PRK09480), RVT-Retrons
pyrE (TIGR00336), rph (PRK00173)