myRT

myRT report for GCA_002068135.1_ASM206813v1

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Seq: CP020351.1 Pseudomonas amygdali pv. lachrymans strain NM002 chromosome, complete genome (6009235 bp)
Overview 1 RT 1: 3469641-3473287 bp 2 RT 2: 3841727-3846152 bp Neighborhood of RT #1 [3469641, 3473287] DUF1566 Avd_like RVT-DGRs HNH_3 AP2 Neighborhood of RT #2 [3841727, 3846196] IS5 COG3293 COG3293 RVT-Retrons DUF1652 Feature: gene Location: 3469641-3470258 bp Ori: ARA81552.1 Feature: domain Description: DUF1566 Location: 3469875-3470238 bp Feature: domain Description: DUF1 566 Location: 3469875-3470238 bp Feature: gene Location: 3470310-3470666 bp Ori: ARA81553.1 Feature: domain Description: Avd_like Location: 3470337-3470643 bp Feature: domain Description: Avd_like Location: 3470337-3470643 bp Feature: gene Location: 3471039-3472040 bp Ori: ARA81554.1 Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 3471132-3471885 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 3471 1 32-3471 885 bp Feature: gene Location: 3472086-3472574 bp Ori: ARA81555.1 Feature: domain Description: HNH_3 Location: 3472254-3472380 bp Feature: domain Description: HNH_3 Location: 3472254-3472380 bp Feature: domain Description: AP2 Location: 3472413-3472524 bp Feature: domain Description: AP2 Location: 347241 3-3472524 bp Feature: gene Location: 3472745-3473287 bp Feature: gene Location: 3841727-3842704 bp Ori: ARA81838.1 Feature: domain Description: IS5 Location: 3841916-3842681 bp Feature: domain Description: IS5 Location: 3841 91 6-3842681 bp Feature: gene Location: 3842810-3843913 bp Ori: ARA81839.1 Feature: domain Description: COG3293 Location: 3843098-3843440 bp Feature: domain Description: COG3293 Location: 3843098-3843440 bp Feature: domain Description: COG3293 Location: 3843464-3843902 bp Feature: domain Description: COG3293 Location: 3843464-3843902 bp Feature: gene Location: 3844256-3845014 bp Ori: ARA81840.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3844406-3845009 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3844406-3845009 bp Feature: gene Location: 3845306-3845555 bp Feature: gene Location: 3845939-3846196 bp Ori: ARA81841.1 Feature: domain Description: DUF1652 Location: 3845954-3846152 bp Feature: domain Description: DUF1 652 Location: 3845954-38461 52 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF1566 (pfam07603), Avd_like (cd16376), RVT-DGRs, HNH_3 (pfam13392), AP2 (smart00380), IS5 (COG3039), COG3293 (Transposase ), RVT-Retrons, DUF1652 (pfam07865)