myRT

myRT report for GCA_002079225.1_ASM207922v1

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Seq: CP020543.1 Escherichia coli C, complete genome (4617024 bp)
Overview 1 RT 1: 1827650-1831482 bp 2 RT 2: 1894390-1897730 bp 3 RT 3: 2333297-2336680 bp 4 RT 4: 3581842-3584763 bp 5 RT 5: 3616320-3620228 bp 6 RT 6: 4011979-4015064 bp Neighborhood of RT #1 [1827650, 1831482] DDE_Tnp_ISL3 COG4584 PHA02517 RVT-GII GIIM Neighborhood of RT #2 [1894390, 1897730] PHA02517 RVT-GII GIIM Neighborhood of RT #3 [2333297, 2336680] HTH_Tnp_1 PHA02517 RVT-GII GIIM Neighborhood of RT #4 [3581842, 3584763] RVT-GII GIIM PHA02517 Neighborhood of RT #5 [3616320, 3620338] RVT-GII GIIM PHA02517 IS285 Neighborhood of RT #6 [4011979, 4015096] RVT-GII GIIM PHA02517 InsE Feature: gene Location: 1827650-1828654 bp Feature: domain Description: DDE_Tnp_ISL3 Location: 1827680-1828037 bp Feature: domain Description: DDE_Tnp_ISL3 Location: 1 827680-1 828037 bp Feature: domain Description: COG4584 Location: 1828094-1828379 bp Feature: domain Description: COG4584 Location: 1 828094-1 828379 bp Feature: gene Location: 1828686-1829153 bp Feature: domain Description: PHA02517 Location: 1828689-1829148 bp Feature: domain Description: PHA0251 7 Location: 1 828689-1 8291 48 bp Feature: gene Location: 1829234-1830757 bp Ori: ARE47225.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1829507-1830239 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 829507-1 830239 bp Feature: domain Description: GIIM Note: maturase Location: 1830314-1830512 bp Feature: domain Description: GIIM Note: maturase Location: 1 83031 4-1 83051 2 bp Feature: gene Location: 1830711-1831136 bp Feature: gene Location: 1831051-1831482 bp Feature: gene Location: 1894390-1894670 bp Feature: gene Location: 1894946-1895422 bp Feature: domain Description: PHA02517 Location: 1894949-1895414 bp Feature: domain Description: PHA0251 7 Location: 1 894949-1 89541 4 bp Feature: gene Location: 1895503-1897026 bp Ori: ARE47280.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1895776-1896508 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 895776-1 896508 bp Feature: domain Description: GIIM Note: maturase Location: 1896583-1896781 bp Feature: domain Description: GIIM Note: maturase Location: 1 896583-1 896781 bp Feature: gene Location: 1896980-1897405 bp Feature: gene Location: 1897320-1897730 bp Feature: gene Location: 2333297-2333560 bp Ori: ARE47719.1 Feature: domain Description: HTH_Tnp_1 Location: 2333303-2333507 bp Feature: domain Description: HTH_Tnp_1 Location: 2333303-2333507 bp Feature: gene Location: 2333884-2334351 bp Feature: domain Description: PHA02517 Location: 2333887-2334346 bp Feature: domain Description: PHA0251 7 Location: 2333887-2334346 bp Feature: gene Location: 2334432-2335955 bp Ori: ARE47720.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2334705-2335437 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2334705-2335437 bp Feature: domain Description: GIIM Note: maturase Location: 2335512-2335710 bp Feature: domain Description: GIIM Note: maturase Location: 233551 2-233571 0 bp Feature: gene Location: 2335909-2336334 bp Feature: gene Location: 2336249-2336680 bp Feature: gene Location: 3581842-3582213 bp Feature: gene Location: 3582128-3582553 bp Feature: gene Location: 3582507-3584030 bp Ori: ARE48843.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3582780-3583512 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3582780-358351 2 bp Feature: domain Description: GIIM Note: maturase Location: 3583587-3583785 bp Feature: domain Description: GIIM Note: maturase Location: 3583587-3583785 bp Feature: gene Location: 3584114-3584593 bp Feature: domain Description: PHA02517 Location: 3584117-3584591 bp Feature: domain Description: PHA0251 7 Location: 35841 1 7-3584591 bp Feature: gene Location: 3584632-3584763 bp Feature: gene Location: 3616320-3616757 bp Feature: gene Location: 3616672-3617097 bp Feature: gene Location: 3617051-3618574 bp Ori: ARE48869.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3617324-3618056 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 361 7324-361 8056 bp Feature: domain Description: GIIM Note: maturase Location: 3618131-3618329 bp Feature: domain Description: GIIM Note: maturase Location: 361 81 31 -361 8329 bp Feature: gene Location: 3618655-3619142 bp Feature: domain Description: PHA02517 Location: 3618658-3618829 bp Feature: domain Description: PHA0251 7 Location: 361 8658-361 8829 bp Feature: gene Location: 3619040-3620338 bp Ori: ARE48870.1 Feature: domain Description: IS285 Location: 3619070-3620228 bp Feature: domain Description: IS285 Location: 361 9070-3620228 bp Feature: gene Location: 4011979-4012350 bp Feature: gene Location: 4012265-4012690 bp Feature: gene Location: 4012644-4014167 bp Ori: ARE49224.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4012917-4013649 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 401 291 7-401 3649 bp Feature: domain Description: GIIM Note: maturase Location: 4013724-4013922 bp Feature: domain Description: GIIM Note: maturase Location: 401 3724-401 3922 bp Feature: gene Location: 4014251-4014730 bp Feature: domain Description: PHA02517 Location: 4014254-4014728 bp Feature: domain Description: PHA0251 7 Location: 401 4254-401 4728 bp Feature: gene Location: 4014770-4015096 bp Ori: ARE49225.1 Feature: domain Description: InsE Location: 4014779-4015064 bp Feature: domain Description: InsE Location: 401 4779-401 5064 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_ISL3 (pfam01610), COG4584 (Transposase ), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), HTH_Tnp_1 (pfam01527), IS285 (COG3328), InsE (COG2963)