myRT

myRT report for GCA_002080065.1_ASM208006v1

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Seq: CP016318.1 Clostridioides difficile strain 630 delta erm, complete genome (4293048 bp)
Overview 1 RT 1: 598305-607162 bp Neighborhood of RT #1 [598305, 607248] Lysozyme_like Spr RVT-GII HNHc TpcC PRK13351 PRK13351 Feature: gene Location: 598305-600470 bp Feature: gene Location: 600467-601411 bp Ori: ARE61407.1 Feature: domain Description: Lysozyme_like Location: 600611-601070 bp Feature: domain Description: Lysozyme_like Location: 60061 1 -601 070 bp Feature: domain Description: Spr Location: 601100-601394 bp Feature: domain Description: Spr Location: 601 1 00-601 394 bp Feature: gene Location: 602125-603954 bp Ori: ARE61408.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 602440-603139 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 602440-6031 39 bp Feature: domain Description: HNHc Note: nucleases Location: 603664-603829 bp Feature: domain Description: HNHc Note: nucleases Location: 603664-603829 bp Feature: gene Location: 604112-605044 bp Ori: ARE61409.1 Feature: domain Description: TpcC Location: 604364-605036 bp Feature: domain Description: TpcC Location: 604364-605036 bp Feature: gene Location: 605329-607248 bp Ori: ARE61410.1 Gene: tetM Feature: domain Description: PRK13351 Location: 605332-605797 bp Feature: domain Description: PRK1 3351 Location: 605332-605797 bp Feature: domain Description: PRK13351 Location: 605857-607162 bp Feature: domain Description: PRK1 3351 Location: 605857-6071 62 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Lysozyme_like (pfam13702), Spr (COG0791), RVT-GII, HNHc (smart00507), TpcC (pfam12642), PRK13351 (elongation factor G-like protein)