myRT

myRT report for GCA_002082015.1_ASM208201v1

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Seq: CP015109.1 Sporosarcina ureae strain P17a, complete genome (3412428 bp)
Overview 1 RT 1: 410100-415915 bp 2 RT 2: 446125-451063 bp 3 RT 3: 1035013-1041228 bp Neighborhood of RT #1 [410100, 415932] PRK02304 recJ ssDNA-exonuc_C RVT-GII recJ Neighborhood of RT #2 [446125, 451086] PRK13927 PRK00024 RVT-GII Intron_maturas2 HNHc RadC Maf Neighborhood of RT #3 [1035013, 1041233] DEDD_Tnp_IS110 Transposase_20 Sa_NUDIX RVT-UG13 Lon_rel_chp Feature: gene Location: 410100-410612 bp Feature: domain Description: PRK02304 Location: 410103-410610 bp Feature: domain Description: PRK02304 Location: 41 01 03-41 061 0 bp Feature: gene Location: 410603-412654 bp Feature: domain Description: recJ Location: 410606-411995 bp Feature: domain Description: recJ Location: 41 0606-41 1 995 bp Feature: domain Description: ssDNA-exonuc_C Location: 412013-412604 bp Feature: domain Description: ssDNA-exonuc_C Location: 41 201 3-41 2604 bp Feature: gene Location: 412840-414729 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 413170-413911 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 41 31 70-41 391 1 bp Feature: gene Location: 415189-415323 bp Feature: gene Location: 415441-415932 bp Feature: domain Description: recJ Location: 415726-415915 bp Feature: domain Description: recJ Location: 41 5726-41 591 5 bp Feature: gene Location: 446125-447138 bp Feature: domain Description: PRK13927 Location: 446134-447130 bp Feature: domain Description: PRK1 3927 Location: 4461 34-4471 30 bp Feature: gene Location: 447308-447574 bp Feature: domain Description: PRK00024 Location: 447374-447572 bp Feature: domain Description: PRK00024 Location: 447374-447572 bp Feature: gene Location: 447617-449428 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 447881-448712 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 447881 -44871 2 bp Feature: domain Description: Intron_maturas2 Location: 448790-449180 bp Feature: domain Description: Intron_maturas2 Location: 448790-4491 80 bp Feature: domain Description: HNHc Note: nucleases Location: 449231-449399 bp Feature: domain Description: HNHc Note: nucleases Location: 449231 -449399 bp Feature: gene Location: 449981-450487 bp Feature: domain Description: RadC Location: 450011-450482 bp Feature: domain Description: RadC Location: 45001 1 -450482 bp Feature: gene Location: 450487-451086 bp Feature: domain Description: Maf Location: 450508-451063 bp Feature: domain Description: Maf Location: 450508-451 063 bp Feature: gene Location: 1035013-1036290 bp Feature: domain Description: DEDD_Tnp_IS110 Location: 1035070-1035550 bp Feature: domain Description: DEDD_Tnp_IS1 1 0 Location: 1 035070-1 035550 bp Feature: domain Description: Transposase_20 Location: 1035874-1036126 bp Feature: domain Description: Transposase_20 Location: 1 035874-1 0361 26 bp Feature: gene Location: 1036374-1036826 bp Feature: domain Description: Sa_NUDIX Location: 1036578-1036809 bp Feature: domain Description: Sa_NUDIX Location: 1 036578-1 036809 bp Feature: gene Location: 1036823-1038586 bp Feature: RT Description: RVT-UG13 Note: UG13 RT Location: 1037330-1037831 bp Feature: RT Description: RVT-UG1 3 Note: UG1 3 RT Location: 1 037330-1 037831 bp Feature: gene Location: 1038655-1039077 bp Feature: gene Location: 1039176-1041233 bp Feature: domain Description: Lon_rel_chp Location: 1039209-1041228 bp Feature: domain Description: Lon_rel_chp Location: 1 039209-1 041 228 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK02304 (adenine phosphoribosyltransferase; Provisional), recJ (TIGR00644), ssDNA-exonuc_C (pfam10141), RVT-GII, PRK13927 (rod shape-determining protein MreB; Provisional), PRK00024 (DNA repair protein RadC), Intron_maturas2 (pfam01348), HNHc (smart00507), RadC (pfam04002), Maf (pfam02545)
DEDD_Tnp_IS110 (pfam01548), Transposase_20 (pfam02371), Sa_NUDIX (pfam18167), RVT-UG13, Lon_rel_chp (TIGR02653)