myRT

myRT report for GCA_002109385.1_ASM210938v1

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Seq: CP020814.1 Bacillus krulwichiae strain AM31D chromosome, complete genome (4610863 bp)
Overview 1 RT 1: 104060-109007 bp 2 RT 2: 423130-426612 bp 3 RT 3: 2987165-2994431 bp 4 RT 4: 3766647-3773391 bp 5 RT 5: 3816054-3819976 bp Neighborhood of RT #1 [104060, 109018] PHA02517 HTH_28 HTH_28 RVT-GII GIIM baeRF_family5 baeRF_family5 CtsR Neighborhood of RT #2 [423130, 426612] RVT-DGRs Neighborhood of RT #3 [2987165, 2994460] lucif_BA3436 IscR RVT-GII GIIM Cupin_7 AcoR Neighborhood of RT #4 [3766647, 3773391] Jag_N FapA FapA RaiA Ribosom_S30AE_C RVT-GII GIIM cold Neighborhood of RT #5 [3816054, 3819976] RVT-DGRs Feature: gene Location: 104060-104629 bp Ori: ARK28478.1 Feature: domain Description: PHA02517 Location: 104117-104621 bp Feature: domain Description: PHA0251 7 Location: 1 041 1 7-1 04621 bp Feature: gene Location: 104656-105174 bp Ori: ARK28479.1 Feature: domain Description: HTH_28 Location: 104722-104809 bp Feature: domain Description: HTH_28 Location: 1 04722-1 04809 bp Feature: domain Description: HTH_28 Location: 104845-105004 bp Feature: domain Description: HTH_28 Location: 1 04845-1 05004 bp Feature: gene Location: 105803-107197 bp Ori: ARK28480.1 Gene: ltrA_1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 106127-106742 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 061 27-1 06742 bp Feature: domain Description: GIIM Note: maturase Location: 106799-107009 bp Feature: domain Description: GIIM Note: maturase Location: 1 06799-1 07009 bp Feature: gene Location: 107518-108306 bp Ori: ARK28481.1 Feature: domain Description: baeRF_family5 Location: 107620-107761 bp Feature: domain Description: baeRF_family5 Location: 1 07620-1 07761 bp Feature: domain Description: baeRF_family5 Location: 107905-108298 bp Feature: domain Description: baeRF_family5 Location: 1 07905-1 08298 bp Feature: gene Location: 108548-109018 bp Ori: ARK28482.1 Gene: ctsR Feature: domain Description: CtsR Location: 108554-109007 bp Feature: domain Description: CtsR Location: 1 08554-1 09007 bp Feature: gene Location: 423130-424323 bp Feature: gene Location: 424272-424685 bp Feature: gene Location: 425009-426091 bp Ori: ARK28806.1 Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 425213-425873 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 42521 3-425873 bp Feature: gene Location: 426033-426266 bp Feature: gene Location: 426460-426612 bp Feature: gene Location: 2987165-2988121 bp Ori: ARK31300.1 Gene: luxA_3 Feature: domain Description: lucif_BA3436 Location: 2987213-2988095 bp Feature: domain Description: lucif_BA3436 Location: 298721 3-2988095 bp Feature: gene Location: 2988797-2989213 bp Ori: ARK31301.1 Gene: ywnA_2 Feature: domain Description: IscR Location: 2988803-2989202 bp Feature: domain Description: IscR Location: 2988803-2989202 bp Feature: gene Location: 2989516-2990910 bp Ori: ARK31302.1 Gene: ltrA_2 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2989840-2990455 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2989840-2990455 bp Feature: domain Description: GIIM Note: maturase Location: 2990512-2990722 bp Feature: domain Description: GIIM Note: maturase Location: 299051 2-2990722 bp Feature: gene Location: 2991487-2991999 bp Ori: ARK31303.1 Feature: domain Description: Cupin_7 Location: 2991589-2991838 bp Feature: domain Description: Cupin_7 Location: 2991 589-2991 838 bp Feature: gene Location: 2992469-2994460 bp Ori: ARK31304.1 Gene: acoR_2 Feature: domain Description: AcoR Location: 2992532-2994431 bp Feature: domain Description: AcoR Location: 2992532-2994431 bp Feature: gene Location: 3766647-3768715 bp Feature: domain Description: Jag_N Location: 3766668-3766806 bp Feature: domain Description: Jag_N Location: 3766668-3766806 bp Feature: domain Description: FapA Location: 3767235-3768159 bp Feature: domain Description: FapA Location: 3767235-37681 59 bp Feature: domain Description: FapA Location: 3768405-3768504 bp Feature: domain Description: FapA Location: 3768405-3768504 bp Feature: gene Location: 3768928-3769479 bp Ori: ARK32072.1 Gene: yvyD_2 Feature: domain Description: RaiA Location: 3768931-3769255 bp Feature: domain Description: RaiA Location: 3768931 -3769255 bp Feature: domain Description: Ribosom_S30AE_C Location: 3769300-3769462 bp Feature: domain Description: Ribosom_S30AE_C Location: 3769300-3769462 bp Feature: gene Location: 3769708-3771102 bp Ori: ARK32073.1 Gene: ltrA_3 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3770032-3770647 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3770032-3770647 bp Feature: domain Description: GIIM Note: maturase Location: 3770704-3770914 bp Feature: domain Description: GIIM Note: maturase Location: 3770704-377091 4 bp Feature: gene Location: 3771602-3771799 bp Ori: ARK32074.1 Gene: cspA_2 Feature: domain Description: cold Location: 3771605-3771794 bp Feature: domain Description: cold Location: 3771 605-3771 794 bp Feature: gene Location: 3772489-3773391 bp Feature: gene Location: 3816054-3816206 bp Feature: gene Location: 3816400-3816633 bp Feature: gene Location: 3816575-3817657 bp Ori: ARK32123.1 Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 3816779-3817439 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 381 6779-381 7439 bp Feature: gene Location: 3817981-3819486 bp Feature: gene Location: 3819515-3819976 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), HTH_28 (pfam13518), RVT-GII, GIIM (pfam08388), baeRF_family5 (pfam18846), CtsR (pfam05848), RVT-DGRs, lucif_BA3436 (TIGR03571), IscR (TIGR02010), Cupin_7 (pfam12973)
AcoR (COG3284), Jag_N (pfam14804), FapA (pfam03961), RaiA (COG1544), Ribosom_S30AE_C (pfam16321), cold (LOAD_cold)