myRT

myRT report for GCA_002111365.1_ASM211136v1

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Seq: CP018383.1 Burkholderia pseudomallei strain 2008724758 chromosome 1, complete sequence (4135235 bp)
Overview 1 RT 1: 1834525-1841478 bp 2 RT 2: 2385847-2389901 bp Neighborhood of RT #1 [1834525, 1841478] RVT-UG8 RVT-UG3 Neighborhood of RT #2 [2385847, 2389987] InsE HTH_21 RVT-GII GIIM PHA02517 Rve Feature: gene Location: 1834525-1834776 bp Feature: gene Location: 1834949-1835266 bp Feature: gene Location: 1835754-1837826 bp Ori: ARK97727.1 Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 1836369-1836825 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 1 836369-1 836825 bp Feature: gene Location: 1837819-1839165 bp Ori: ARK97728.1 Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 1838269-1838749 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 1 838269-1 838749 bp Feature: gene Location: 1839744-1841132 bp Feature: gene Location: 1841155-1841478 bp Feature: gene Location: 2385847-2386155 bp Ori: ARK98192.1 Feature: domain Description: InsE Location: 2385850-2386123 bp Feature: domain Description: InsE Location: 2385850-23861 23 bp Feature: gene Location: 2386152-2386520 bp Feature: domain Description: HTH_21 Location: 2386254-2386404 bp Feature: domain Description: HTH_21 Location: 2386254-2386404 bp Feature: gene Location: 2387201-2388718 bp Ori: ARK98193.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2387459-2388197 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2387459-23881 97 bp Feature: domain Description: GIIM Note: maturase Location: 2388308-2388479 bp Feature: domain Description: GIIM Note: maturase Location: 2388308-2388479 bp Feature: gene Location: 2388787-2389269 bp Feature: domain Description: PHA02517 Location: 2388820-2389255 bp Feature: domain Description: PHA0251 7 Location: 2388820-2389255 bp Feature: gene Location: 2389253-2389987 bp Ori: ARK98194.1 Feature: domain Description: Rve Location: 2389283-2389901 bp Feature: domain Description: Rve Location: 2389283-2389901 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG8, RVT-UG3, InsE (COG2963), HTH_21 (pfam13276), RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed), Rve (COG3316)

Seq: CP018382.1 Burkholderia pseudomallei strain 2008724758 chromosome 2, complete sequence (3248554 bp)
Overview 1 RT 1: 900707-904911 bp 2 RT 2: 1444827-1448769 bp 3 RT 3: 3225705-3229329 bp Neighborhood of RT #1 [900707, 904943] HTH_Crp_2 PHA02517 RVT-GII GIIM HTH_21 InsE Neighborhood of RT #2 [1444827, 1448768] InsE HTH_21 RVT-GII GIIM PHA02517 Tra5 Neighborhood of RT #3 [3225705, 3229329] InsE HTH_21 RVT-GII GIIM PHA02517 Feature: gene Location: 900707-901537 bp Ori: ARK93845.1 Feature: domain Description: HTH_Crp_2 Location: 901007-901151 bp Feature: domain Description: HTH_Crp_2 Location: 901007-901151 bp Feature: gene Location: 901521-902003 bp Feature: domain Description: PHA02517 Location: 901554-901989 bp Feature: domain Description: PHA02 517 Location: 901554-901989 bp Feature: gene Location: 902072-903589 bp Ori: ARK93846.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 902330-903068 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 902 330-903068 bp Feature: domain Description: GIIM Note: maturase Location: 903179-903350 bp Feature: domain Description: GIIM Note: maturase Location: 903179-903350 bp Feature: gene Location: 904270-904638 bp Feature: domain Description: HTH_21 Location: 904372-904522 bp Feature: domain Description: HTH_2 1 Location: 904372 -90452 2 bp Feature: gene Location: 904635-904943 bp Ori: ARK93847.1 Feature: domain Description: InsE Location: 904638-904911 bp Feature: domain Description: InsE Location: 904638-904911 bp Feature: gene Location: 1444827-1445135 bp Ori: ARK94291.1 Feature: domain Description: InsE Location: 1444830-1445103 bp Feature: domain Description: InsE Location: 1444830-1445103 bp Feature: gene Location: 1445132-1445500 bp Feature: domain Description: HTH_21 Location: 1445234-1445384 bp Feature: domain Description: HTH_2 1 Location: 14452 34-1445384 bp Feature: gene Location: 1446181-1447698 bp Ori: ARK94292.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1446439-1447177 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1446439-1447177 bp Feature: domain Description: GIIM Note: maturase Location: 1447288-1447459 bp Feature: domain Description: GIIM Note: maturase Location: 14472 88-1447459 bp Feature: gene Location: 1447767-1448249 bp Feature: domain Description: PHA02517 Location: 1447800-1448235 bp Feature: domain Description: PHA02 517 Location: 1447800-14482 35 bp Feature: gene Location: 1448313-1448768 bp Feature: domain Description: Tra5 Location: 1448505-1448769 bp Feature: domain Description: Tra5 Location: 1448505-1448769 bp Feature: gene Location: 3225705-3226013 bp Ori: ARK95722.1 Feature: domain Description: InsE Location: 3225708-3225981 bp Feature: domain Description: InsE Location: 32 2 5708-32 2 5981 bp Feature: gene Location: 3226010-3226378 bp Feature: domain Description: HTH_21 Location: 3226112-3226262 bp Feature: domain Description: HTH_2 1 Location: 32 2 6112 -32 2 62 62 bp Feature: gene Location: 3227059-3228576 bp Ori: ARK95723.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3227317-3228055 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32 2 7317-32 2 8055 bp Feature: domain Description: GIIM Note: maturase Location: 3228166-3228337 bp Feature: domain Description: GIIM Note: maturase Location: 32 2 8166-32 2 8337 bp Feature: gene Location: 3228645-3229127 bp Feature: domain Description: PHA02517 Location: 3228678-3229113 bp Feature: domain Description: PHA02 517 Location: 32 2 8678-32 2 9113 bp Feature: gene Location: 3229111-3229329 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_Crp_2 (pfam13545), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), HTH_21 (pfam13276), InsE (COG2963), Tra5 (COG2801)