myRT

myRT report for GCA_002119445.1_ASM211944v1

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Seq: CP021064.1 Bacillus thuringiensis strain ATCC 10792 plasmid poh3, complete sequence (92949 bp)
Overview 1 RT 1: 72465-77093 bp Neighborhood of RT #1 [72465, 77098] recomb_XerD DDE_Tnp_1 RVT-GII GIIM DDE_Tnp_1 Feature: gene Location: 72465-73319 bp Ori: ARP61751.1 Feature: domain Description: recomb_XerD Location: 72483-73308 bp Feature: domain Description: recomb_XerD Location: 72483-73308 bp Feature: gene Location: 73692-74084 bp Feature: domain Description: DDE_Tnp_1 Location: 73701-73803 bp Feature: domain Description: DDE_Tnp_1 Location: 73701 -73803 bp Feature: gene Location: 74228-75535 bp Ori: ARP61752.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 74513-75152 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7451 3-751 52 bp Feature: domain Description: GIIM Note: maturase Location: 75227-75452 bp Feature: domain Description: GIIM Note: maturase Location: 75227-75452 bp Feature: gene Location: 75709-75888 bp Feature: gene Location: 76049-77098 bp Feature: domain Description: DDE_Tnp_1 Location: 76406-77093 bp Feature: domain Description: DDE_Tnp_1 Location: 76406-77093 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT recomb_XerD (TIGR02225), DDE_Tnp_1 (pfam01609), RVT-GII, GIIM (pfam08388)

Seq: CP021061.1 Bacillus thuringiensis strain ATCC 10792 chromosome, complete genome (5427594 bp)
Overview 1 RT 1: 464868-470581 bp 2 RT 2: 872241-879459 bp 3 RT 3: 3811957-3818138 bp 4 RT 4: 5051224-5055693 bp Neighborhood of RT #1 [464868, 470619] Methyltransf_25 gly_Cac_T_rel RVT-GII HNHc gly_Cac_T_rel TDH_SDR_e Neighborhood of RT #2 [872241, 879539] HTH_28 HTH_28 HTH_28 RVT-GII HNHc ETR_like Ntn_PVA Neighborhood of RT #3 [3811957, 3818194] HTH_28 HTH_28 amiF RVT-GII HNHc amiF caa3_CtaG Neighborhood of RT #4 [5051224, 5055716] DEDD_Tnp_IS110 RVT-GII PRK10420 DUF4870 Feature: gene Location: 464868-465599 bp Ori: ARP56013.1 Feature: domain Description: Methyltransf_25 Location: 465015-465288 bp Feature: domain Description: Methyltransf_2 5 Location: 465015-4652 88 bp Feature: gene Location: 465813-466652 bp Feature: domain Description: gly_Cac_T_rel Location: 465843-466653 bp Feature: domain Description: gly_Cac_T_rel Location: 465843-466653 bp Feature: gene Location: 466752-468557 bp Ori: ARP56014.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 467046-467742 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 467046-467742 bp Feature: domain Description: HNHc Note: nucleases Location: 468303-468441 bp Feature: domain Description: HNHc Note: nucleases Location: 468303-468441 bp Feature: gene Location: 469271-469609 bp Ori: ARP56015.1 Feature: domain Description: gly_Cac_T_rel Location: 469277-469607 bp Feature: domain Description: gly_Cac_T_rel Location: 4692 77-469607 bp Feature: gene Location: 469654-470619 bp Ori: ARP56016.1 Feature: domain Description: TDH_SDR_e Location: 469663-470581 bp Feature: domain Description: TDH_SDR_e Location: 469663-470581 bp Feature: gene Location: 872241-873802 bp Feature: domain Description: HTH_28 Location: 872271-872406 bp Feature: domain Description: HTH_2 8 Location: 872 2 71-872 406 bp Feature: domain Description: HTH_28 Location: 872445-872568 bp Feature: domain Description: HTH_2 8 Location: 872 445-872 568 bp Feature: domain Description: HTH_28 Location: 872634-872790 bp Feature: domain Description: HTH_2 8 Location: 872 634-872 790 bp Feature: gene Location: 874408-874713 bp Feature: gene Location: 874941-876746 bp Ori: ARP56415.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 875235-875931 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8752 35-875931 bp Feature: domain Description: HNHc Note: nucleases Location: 876492-876630 bp Feature: domain Description: HNHc Note: nucleases Location: 876492 -876630 bp Feature: gene Location: 877420-878406 bp Ori: ARP60900.1 Feature: domain Description: ETR_like Location: 877444-878380 bp Feature: domain Description: ETR_like Location: 877444-878380 bp Feature: gene Location: 878553-879539 bp Ori: ARP56416.1 Feature: domain Description: Ntn_PVA Location: 878559-879459 bp Feature: domain Description: Ntn_PVA Location: 878559-879459 bp Feature: gene Location: 3811957-3813311 bp Feature: domain Description: HTH_28 Location: 3811981-3812122 bp Feature: domain Description: HTH_2 8 Location: 3811981-3812 12 2 bp Feature: domain Description: HTH_28 Location: 3812146-3812305 bp Feature: domain Description: HTH_2 8 Location: 3812 146-3812 305 bp Feature: gene Location: 3813377-3814000 bp Ori: ARP59247.1 Feature: domain Description: amiF Location: 3813380-3813995 bp Feature: domain Description: amiF Location: 3813380-3813995 bp Feature: gene Location: 3814117-3815949 bp Ori: ARP59248.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3814417-3815122 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3814417-381512 2 bp Feature: domain Description: HNHc Note: nucleases Location: 3815701-3815833 bp Feature: domain Description: HNHc Note: nucleases Location: 3815701-3815833 bp Feature: gene Location: 3816665-3817054 bp Ori: ARP59249.1 Feature: domain Description: amiF Location: 3816668-3817040 bp Feature: domain Description: amiF Location: 3816668-3817040 bp Feature: gene Location: 3817289-3818194 bp Ori: ARP59250.1 Feature: domain Description: caa3_CtaG Location: 3817298-3818138 bp Feature: domain Description: caa3_CtaG Location: 38172 98-3818138 bp Feature: gene Location: 5051224-5051526 bp Feature: gene Location: 5051938-5053082 bp Feature: domain Description: DEDD_Tnp_IS110 Location: 5051953-5052427 bp Feature: domain Description: DEDD_Tnp_IS110 Location: 5051953-5052 42 7 bp Feature: gene Location: 5053012-5053242 bp Ori: ARP61072.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5053060-5053180 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5053060-5053180 bp Feature: gene Location: 5053442-5055103 bp Ori: ARP60536.1 Feature: domain Description: PRK10420 Location: 5053445-5055101 bp Feature: domain Description: PRK1042 0 Location: 5053445-5055101 bp Feature: gene Location: 5055399-5055716 bp Ori: ARP60537.1 Feature: domain Description: DUF4870 Location: 5055417-5055693 bp Feature: domain Description: DUF4870 Location: 5055417-5055693 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Methyltransf_25 (pfam13649), gly_Cac_T_rel (TIGR01825), RVT-GII, HNHc (smart00507), TDH_SDR_e (cd05272), HTH_28 (pfam13518), ETR_like (cd05282), Ntn_PVA (cd00542), amiF (PRK13287), caa3_CtaG (TIGR02737)
DEDD_Tnp_IS110 (pfam01548), PRK10420 (L-lactate permease; Provisional), DUF4870 (pfam09685)

Seq: CP021065.1 Bacillus thuringiensis strain ATCC 10792 plasmid poh4, complete sequence (86488 bp)
Overview 1 RT 1: 63877-71435 bp Neighborhood of RT #1 [63877, 71435] MobL SXT_TraD RVT-GII HNHc T4SS-DNA_transf Feature: gene Location: 63877-66420 bp Ori: ARP61844.1 Feature: domain Description: MobL Location: 63925-64894 bp Feature: domain Description: MobL Location: 63 925-64894 bp Feature: gene Location: 66678-67001 bp Ori: ARP61865.1 Feature: domain Description: SXT_TraD Location: 66789-66987 bp Feature: domain Description: SXT_TraD Location: 66789-66987 bp Feature: gene Location: 67717-69549 bp Ori: ARP61845.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 68017-68722 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 68017-68722 bp Feature: domain Description: HNHc Note: nucleases Location: 69301-69433 bp Feature: domain Description: HNHc Note: nucleases Location: 693 01-6943 3 bp Feature: gene Location: 69690-71042 bp Ori: ARP61846.1 Feature: domain Description: T4SS-DNA_transf Location: 69696-70767 bp Feature: domain Description: T4SS-DNA_transf Location: 69696-70767 bp Feature: gene Location: 71055-71435 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MobL (pfam18555), SXT_TraD (TIGR03743), RVT-GII, HNHc (smart00507), T4SS-DNA_transf (pfam02534)

Seq: CP021062.1 Bacillus thuringiensis strain ATCC 10792 plasmid poh1, complete sequence (584623 bp)
Overview 1 RT 1: 17725-23338 bp 2 RT 2: 31168-41676 bp 3 RT 3: 92060-112332 bp 4 RT 4: 153855-158702 bp Neighborhood of RT #1 [17725, 23338] LolE LolE ABC_MJ0796_LolCDE_FtsE RVT-GII HNHc Neighborhood of RT #2 [31168, 41676] rpsA TraG-D_C Ftsk_gamma Ftsk_gamma RVT-GII GIIM HNHc RVT-GII Intron_maturas2 HNHc Neighborhood of RT #3 [92060, 112332] TraC-F-type RVT-GII HNHc TraC-F-type TrbL CwlT_like RVT-GII HNHc CwlT_like RVT-GII HNHc CwlT_like RVT-GII Intron_maturas2 HNHc NlpD Spr Neighborhood of RT #4 [153855, 159022] DDE_Tnp_1 RVT-GII GIIM DDE_Tnp_1 CzcO Feature: gene Location: 17725-20277 bp Ori: ARP61101.1 Feature: domain Description: LolE Location: 17746-18862 bp Feature: domain Description: LolE Location: 1774 6-18862 bp Feature: domain Description: LolE Location: 19117-20272 bp Feature: domain Description: LolE Location: 19117-20272 bp Feature: gene Location: 20268-20744 bp Ori: ARP61102.1 Feature: domain Description: ABC_MJ0796_LolCDE_FtsE Location: 20298-20670 bp Feature: domain Description: ABC_MJ0796_LolCDE_FtsE Location: 20298-20670 bp Feature: gene Location: 20810-22606 bp Ori: ARP61103.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21068-21773 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21068-21773 bp Feature: domain Description: HNHc Note: nucleases Location: 22334-22469 bp Feature: domain Description: HNHc Note: nucleases Location: 22334 -224 69 bp Feature: gene Location: 22769-22999 bp Feature: gene Location: 23150-23338 bp Feature: gene Location: 31168-32151 bp Ori: ARP61111.1 Feature: domain Description: rpsA Location: 31435-31972 bp Feature: domain Description: rpsA Location: 314 35-31972 bp Feature: gene Location: 32410-34176 bp Ori: ARP61112.1 Feature: domain Description: TraG-D_C Location: 32422-32740 bp Feature: domain Description: TraG-D_C Location: 324 22-3274 0 bp Feature: domain Description: Ftsk_gamma Location: 33166-33346 bp Feature: domain Description: Ftsk_gamma Location: 33166-3334 6 bp Feature: domain Description: Ftsk_gamma Location: 33499-33643 bp Feature: domain Description: Ftsk_gamma Location: 334 99-3364 3 bp Feature: gene Location: 34409-36283 bp Ori: ARP61113.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 34709-35414 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 34 709-354 14 bp Feature: domain Description: GIIM Note: maturase Location: 35528-35696 bp Feature: domain Description: GIIM Note: maturase Location: 35528-35696 bp Feature: domain Description: HNHc Note: nucleases Location: 36044-36209 bp Feature: domain Description: HNHc Note: nucleases Location: 3604 4 -36209 bp Feature: gene Location: 36956-37504 bp Feature: gene Location: 37616-39439 bp Ori: ARP61114.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 37886-38714 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 37886-38714 bp Feature: domain Description: Intron_maturas2 Location: 38786-39104 bp Feature: domain Description: Intron_maturas2 Location: 38786-39104 bp Feature: domain Description: HNHc Note: nucleases Location: 39257-39410 bp Feature: domain Description: HNHc Note: nucleases Location: 39257-394 10 bp Feature: gene Location: 40040-41185 bp Feature: gene Location: 41203-41676 bp Feature: gene Location: 92060-92974 bp Feature: gene Location: 92977-93948 bp Ori: ARP61164.1 Feature: domain Description: TraC-F-type Location: 93397-93871 bp Feature: domain Description: TraC-F-type Location: 93397-93871 bp Feature: gene Location: 94677-96509 bp Ori: ARP61165.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 94977-95682 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 94 977-95682 bp Feature: domain Description: HNHc Note: nucleases Location: 96261-96393 bp Feature: domain Description: HNHc Note: nucleases Location: 96261-96393 bp Feature: gene Location: 96801-97769 bp Ori: ARP61166.1 Feature: domain Description: TraC-F-type Location: 96828-97608 bp Feature: domain Description: TraC-F-type Location: 96828-97608 bp Feature: gene Location: 97800-101726 bp Ori: ARP61167.1 Feature: domain Description: TrbL Location: 98091-98577 bp Feature: domain Description: TrbL Location: 98091-98577 bp Feature: gene Location: 101723-102721 bp Ori: ARP61168.1 Feature: domain Description: CwlT_like Location: 102575-102698 bp Feature: domain Description: CwlT_like Location: 102575-102698 bp Feature: gene Location: 103395-105200 bp Ori: ARP61169.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 103689-104385 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 103689-104 385 bp Feature: domain Description: HNHc Note: nucleases Location: 104946-105084 bp Feature: domain Description: HNHc Note: nucleases Location: 104 94 6-105084 bp Feature: gene Location: 105316-105483 bp Ori: ARP61170.1 Feature: domain Description: CwlT_like Location: 105358-105466 bp Feature: domain Description: CwlT_like Location: 105358-1054 66 bp Feature: gene Location: 105524-105712 bp Feature: gene Location: 105863-106093 bp Feature: gene Location: 106256-108052 bp Ori: ARP61172.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 106514-107219 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 106514 -107219 bp Feature: domain Description: HNHc Note: nucleases Location: 107780-107915 bp Feature: domain Description: HNHc Note: nucleases Location: 107780-107915 bp Feature: gene Location: 108121-108312 bp Ori: ARP61173.1 Feature: domain Description: CwlT_like Location: 108148-108301 bp Feature: domain Description: CwlT_like Location: 10814 8-108301 bp Feature: gene Location: 108888-110711 bp Ori: ARP61174.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 109152-109986 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 109152-109986 bp Feature: domain Description: Intron_maturas2 Location: 110055-110394 bp Feature: domain Description: Intron_maturas2 Location: 110055-110394 bp Feature: domain Description: HNHc Note: nucleases Location: 110532-110688 bp Feature: domain Description: HNHc Note: nucleases Location: 110532-110688 bp Feature: gene Location: 110844-111740 bp Ori: ARP61175.1 Feature: domain Description: NlpD Location: 110886-111312 bp Feature: domain Description: NlpD Location: 110886-111312 bp Feature: domain Description: Spr Location: 111345-111681 bp Feature: domain Description: Spr Location: 11134 5-111681 bp Feature: gene Location: 111757-112332 bp Feature: gene Location: 153855-154888 bp Feature: domain Description: DDE_Tnp_1 Location: 154212-154680 bp Feature: domain Description: DDE_Tnp_1 Location: 154 212-154 680 bp Feature: gene Location: 155055-155234 bp Feature: gene Location: 155408-156715 bp Ori: ARP61215.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 155693-156332 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 155693-156332 bp Feature: domain Description: GIIM Note: maturase Location: 156407-156632 bp Feature: domain Description: GIIM Note: maturase Location: 1564 07-156632 bp Feature: gene Location: 156859-157245 bp Feature: domain Description: DDE_Tnp_1 Location: 156868-156970 bp Feature: domain Description: DDE_Tnp_1 Location: 156868-156970 bp Feature: gene Location: 157595-159022 bp Ori: ARP61216.1 Feature: domain Description: CzcO Location: 157697-158702 bp Feature: domain Description: CzcO Location: 157697-158702 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT LolE (COG4591), ABC_MJ0796_LolCDE_FtsE (cd03255), RVT-GII, HNHc (smart00507), rpsA (TIGR00717), TraG-D_C (pfam12696), Ftsk_gamma (smart00843), GIIM (pfam08388), Intron_maturas2 (pfam01348), TraC-F-type (TIGR02746)
TrbL (pfam04610), CwlT_like, NlpD (COG0739), Spr (COG0791), DDE_Tnp_1 (pfam01609), CzcO (COG2072)

Seq: CP021063.1 Bacillus thuringiensis strain ATCC 10792 plasmid poh2, complete sequence (113294 bp)
Overview 1 RT 1: 13364-21083 bp 2 RT 2: 110858-114748 bp Neighborhood of RT #1 [13364, 21083] MobA_MobL VirD4 RVT-GII HNHc T4SS-DNA_transf Neighborhood of RT #2 [110858, 114864] Glucosaminidase Spr TraC-F-type RVT-GII HNHc Feature: gene Location: 13364-15433 bp Ori: ARP61668.1 Feature: domain Description: MobA_MobL Location: 13475-14096 bp Feature: domain Description: MobA_MobL Location: 13475 -14096 bp Feature: gene Location: 15444-16037 bp Ori: ARP61563.1 Feature: domain Description: VirD4 Location: 15609-16026 bp Feature: domain Description: VirD4 Location: 15 609-16026 bp Feature: gene Location: 16753-18585 bp Ori: ARP61564.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17053-17758 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1705 3-1775 8 bp Feature: domain Description: HNHc Note: nucleases Location: 18337-18469 bp Feature: domain Description: HNHc Note: nucleases Location: 18337-18469 bp Feature: gene Location: 18702-20384 bp Ori: ARP61565.1 Feature: domain Description: T4SS-DNA_transf Location: 18705-19791 bp Feature: domain Description: T4SS-DNA_transf Location: 18705 -19791 bp Feature: gene Location: 20652-21083 bp Feature: gene Location: 110858-111895 bp Ori: ARP61666.1 Feature: domain Description: Glucosaminidase Location: 111110-111350 bp Feature: domain Description: Glucosaminidase Location: 111110-11135 0 bp Feature: domain Description: Spr Location: 111530-111875 bp Feature: domain Description: Spr Location: 1115 30-111875 bp Feature: gene Location: 111911-112744 bp Ori: ARP61673.1 Feature: domain Description: TraC-F-type Location: 112040-112595 bp Feature: domain Description: TraC-F-type Location: 112040-1125 95 bp Feature: gene Location: 113032-114864 bp Ori: ARP61667.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 113332-114037 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 113332-114037 bp Feature: domain Description: HNHc Note: nucleases Location: 114616-114748 bp Feature: domain Description: HNHc Note: nucleases Location: 114616-114748 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MobA_MobL (pfam03389), VirD4 (COG3505), RVT-GII, HNHc (smart00507), T4SS-DNA_transf (pfam02534), Glucosaminidase (pfam01832), Spr (COG0791), TraC-F-type (TIGR02746)