myRT

myRT report for GCA_002119525.1_ASM211952v1

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Seq: CP017917.1 Vibrio alginolyticus strain K08M4 chromosome 2, complete sequence (1587964 bp)
Overview 1 RT 1: 1136717-1142918 bp Neighborhood of RT #1 [1136717, 1143028] Ntn_CGH PleD RVT_N RVT-GII GIIM HTH_29 HTH_33 DDE_3 Feature: gene Location: 1136717-1137871 bp Ori: ARP40623.1 Gene: cbh Feature: domain Description: Ntn_CGH Location: 1136720-1137746 bp Feature: domain Description: Ntn_CGH Location: 1 1 36720-1 1 37746 bp Feature: gene Location: 1137881-1138927 bp Ori: ARP40624.1 Feature: domain Description: PleD Location: 1138430-1138910 bp Feature: domain Description: PleD Location: 1 1 38430-1 1 3891 0 bp Feature: gene Location: 1139525-1141114 bp Ori: ARP40625.1 Feature: domain Description: RVT_N Location: 1139690-1139933 bp Feature: domain Description: RVT_N Location: 1 1 39690-1 1 39933 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1139978-1140605 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 39978-1 1 40605 bp Feature: domain Description: GIIM Note: maturase Location: 1140665-1140890 bp Feature: domain Description: GIIM Note: maturase Location: 1 1 40665-1 1 40890 bp Feature: gene Location: 1141515-1141892 bp Feature: gene Location: 1142000-1143028 bp Ori: ARP40627.1 Feature: domain Description: HTH_29 Location: 1142084-1142252 bp Feature: domain Description: HTH_29 Location: 1 1 42084-1 1 42252 bp Feature: domain Description: HTH_33 Location: 1142282-1142450 bp Feature: domain Description: HTH_33 Location: 1 1 42282-1 1 42450 bp Feature: domain Description: DDE_3 Location: 1142489-1142918 bp Feature: domain Description: DDE_3 Location: 1 1 42489-1 1 4291 8 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Ntn_CGH (cd01902), PleD (COG3706), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HTH_29 (pfam13551), HTH_33 (pfam13592), DDE_3 (pfam13358)