myRT

myRT report for GCA_002142695.1_ASM214269v1

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Seq: CP021175.1 Escherichia coli strain 5CRE51 chromosome, complete genome (5041366 bp)
Overview 1 RT 1: 376927-379946 bp 2 RT 2: 847140-852665 bp 3 RT 3: 3962321-3965399 bp 4 RT 4: 4378330-4383033 bp 5 RT 5: 4711981-4714791 bp 6 RT 6: 4731767-4734900 bp Neighborhood of RT #1 [376927, 380003] RVT-GII GIIM PHA02517 SH3_2 SH3_2 Neighborhood of RT #2 [847140, 852772] InsE Arm-DNA-bind_3 RVT-Retrons PRK09678 Neighborhood of RT #3 [3962321, 3965401] RVT-GII GIIM PHA02517 FimA Neighborhood of RT #4 [4378330, 4383033] RVT-GII GIIM PHA02517 Neighborhood of RT #5 [4711981, 4714791] RVT-GII GIIM Neighborhood of RT #6 [4731767, 4734900] RVT-GII GIIM PHA02517 Feature: gene Location: 376927-377298 bp Feature: gene Location: 377213-377638 bp Feature: gene Location: 377592-379115 bp Ori: ARR31981.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 377865-378597 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 377865-378597 bp Feature: domain Description: GIIM Note: maturase Location: 378672-378870 bp Feature: domain Description: GIIM Note: maturase Location: 378672-378870 bp Feature: gene Location: 379199-379678 bp Feature: domain Description: PHA02517 Location: 379202-379676 bp Feature: domain Description: PHA0251 7 Location: 379202-379676 bp Feature: gene Location: 379721-380003 bp Feature: domain Description: SH3_2 Location: 379736-379799 bp Feature: domain Description: SH3_2 Location: 379736-379799 bp Feature: domain Description: SH3_2 Location: 379829-379946 bp Feature: domain Description: SH3_2 Location: 379829-379946 bp Feature: gene Location: 847140-848353 bp Feature: domain Description: InsE Location: 847143-847482 bp Feature: domain Description: InsE Location: 8471 43-847482 bp Feature: gene Location: 848584-849497 bp Feature: domain Description: Arm-DNA-bind_3 Location: 848593-848845 bp Feature: domain Description: Arm-DNA-bind_3 Location: 848593-848845 bp Feature: gene Location: 849952-850884 bp Ori: ARR32402.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 850054-850648 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 850054-850648 bp Feature: gene Location: 850886-851854 bp Feature: gene Location: 852500-852772 bp Ori: ARR32404.1 Feature: domain Description: PRK09678 Location: 852509-852665 bp Feature: domain Description: PRK09678 Location: 852509-852665 bp Feature: gene Location: 3962321-3962692 bp Feature: gene Location: 3962607-3963032 bp Feature: gene Location: 3962986-3964509 bp Ori: ARR35270.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3963259-3963991 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3963259-3963991 bp Feature: domain Description: GIIM Note: maturase Location: 3964066-3964264 bp Feature: domain Description: GIIM Note: maturase Location: 3964066-3964264 bp Feature: gene Location: 3964593-3965072 bp Feature: domain Description: PHA02517 Location: 3964596-3965070 bp Feature: domain Description: PHA0251 7 Location: 3964596-3965070 bp Feature: gene Location: 3965144-3965401 bp Ori: ARR35271.1 Feature: domain Description: FimA Location: 3965150-3965399 bp Feature: domain Description: FimA Location: 39651 50-3965399 bp Feature: gene Location: 4378330-4378701 bp Feature: gene Location: 4378616-4379041 bp Feature: gene Location: 4378995-4380518 bp Ori: ARR35650.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4379268-4380000 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4379268-4380000 bp Feature: domain Description: GIIM Note: maturase Location: 4380075-4380273 bp Feature: domain Description: GIIM Note: maturase Location: 4380075-4380273 bp Feature: gene Location: 4380602-4381081 bp Feature: domain Description: PHA02517 Location: 4380605-4381079 bp Feature: domain Description: PHA0251 7 Location: 4380605-4381 079 bp Feature: gene Location: 4381123-4383033 bp Feature: gene Location: 4711981-4712055 bp Feature: gene Location: 4712039-4712519 bp Feature: gene Location: 4712603-4714126 bp Ori: ARR35964.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4712876-4713608 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 471 2876-471 3608 bp Feature: domain Description: GIIM Note: maturase Location: 4713683-4713881 bp Feature: domain Description: GIIM Note: maturase Location: 471 3683-471 3881 bp Feature: gene Location: 4714080-4714505 bp Feature: gene Location: 4714420-4714791 bp Feature: gene Location: 4731767-4732138 bp Feature: gene Location: 4732053-4732478 bp Feature: gene Location: 4732432-4733955 bp Ori: ARR35982.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4732705-4733437 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4732705-4733437 bp Feature: domain Description: GIIM Note: maturase Location: 4733512-4733710 bp Feature: domain Description: GIIM Note: maturase Location: 473351 2-473371 0 bp Feature: gene Location: 4734039-4734518 bp Feature: domain Description: PHA02517 Location: 4734042-4734516 bp Feature: domain Description: PHA0251 7 Location: 4734042-473451 6 bp Feature: gene Location: 4734561-4734900 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed), SH3_2 (pfam07653), InsE (COG2963), Arm-DNA-bind_3 (pfam13356), RVT-Retrons, PRK09678 (DNA-binding transcriptional regulator; Provisional), FimA (pfam16970)