myRT

myRT report for GCA_002142715.1_ASM214271v1

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Seq: CP021207.1 Escherichia coli strain strain Z247 chromosome, complete genome (5013813 bp)
Overview 1 RT 1: 257974-262872 bp Neighborhood of RT #1 [257974, 262872] RVT-Retrons Feature: gene Location: 257974-258204 bp Feature: gene Location: 258419-258658 bp Feature: gene Location: 259229-260986 bp Ori: ARR63651.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 259373-259991 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 259373-259991 bp Feature: gene Location: 261233-262360 bp Feature: gene Location: 262357-262872 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons

Seq: CP021210.1 Escherichia coli strain strain Z247 plasmid p2474-NDM1, complete sequence (75553 bp)
Overview 1 RT 1: 28297-31900 bp Neighborhood of RT #1 [28297, 32025] RVT_N RVT-GII GIIM HNHc DUF1380 Feature: gene Location: 28297-28554 bp Feature: gene Location: 28703-28891 bp Feature: gene Location: 29434-31101 bp Ori: ARR68585.1 Feature: domain Description: RVT_N Location: 29482-29719 bp Feature: domain Description: RVT_N Location: 2 9482 -2 9719 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 29770-30412 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 9770-30412 bp Feature: domain Description: GIIM Note: maturase Location: 30463-30697 bp Feature: domain Description: GIIM Note: maturase Location: 30463-30697 bp Feature: domain Description: HNHc Note: nucleases Location: 30907-31066 bp Feature: domain Description: HNHc Note: nucleases Location: 30907-31066 bp Feature: gene Location: 31415-31606 bp Feature: gene Location: 31603-32025 bp Ori: ARR68587.1 Feature: domain Description: DUF1380 Location: 31606-31900 bp Feature: domain Description: DUF1380 Location: 31606-31900 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), DUF1380 (pfam07128)