myRT

myRT report for GCA_002151545.1_ASM215154v1

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Seq: CP021237.1 Sphingobacteriaceae bacterium GW460-11-11-14-LB5 chromosome, complete genome (6182066 bp)
Overview 1 RT 1: 116581-123656 bp 2 RT 2: 1087042-1095735 bp Neighborhood of RT #1 [116581, 123688] PRK09685 AraC DUF4262 RVT-UG3 RVT-UG8 DinB_2 Neighborhood of RT #2 [1087042, 1095735] LpqC RVT-Retrons WGR_DNA_ligase Feature: gene Location: 116581-117393 bp Ori: ARS38252.1 Feature: domain Description: PRK09685 Location: 116671-116767 bp Feature: domain Description: PRK09685 Location: 1 1 6671 -1 1 6767 bp Feature: domain Description: AraC Location: 117106-117382 bp Feature: domain Description: AraC Location: 1 1 71 06-1 1 7382 bp Feature: gene Location: 117423-117878 bp Ori: ARS42838.1 Feature: domain Description: DUF4262 Location: 117471-117840 bp Feature: domain Description: DUF4262 Location: 1 1 7471 -1 1 7840 bp Feature: gene Location: 118156-119790 bp Ori: ARS38253.1 Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 118588-119050 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 1 1 8588-1 1 9050 bp Feature: gene Location: 119790-121988 bp Ori: ARS38254.1 Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 120387-120834 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 1 20387-1 20834 bp Feature: gene Location: 122169-122939 bp Feature: gene Location: 123215-123688 bp Ori: ARS38256.1 Feature: domain Description: DinB_2 Location: 123248-123656 bp Feature: domain Description: DinB_2 Location: 1 23248-1 23656 bp Feature: gene Location: 1087042-1088295 bp Ori: ARS38984.1 Feature: domain Description: LpqC Location: 1087243-1087684 bp Feature: domain Description: LpqC Location: 1 087243-1 087684 bp Feature: gene Location: 1088397-1088585 bp Feature: gene Location: 1089208-1090737 bp Ori: ARS38986.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1089748-1090363 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 089748-1 090363 bp Feature: gene Location: 1090749-1094093 bp Ori: ARS38987.1 Feature: domain Description: WGR_DNA_ligase Location: 1090767-1090989 bp Feature: domain Description: WGR_DNA_ligase Location: 1 090767-1 090989 bp Feature: gene Location: 1094077-1095735 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09685 (DNA-binding transcriptional activator FeaR; Provisional), AraC (COG2207), DUF4262 (pfam14081), RVT-UG3, RVT-UG8, DinB_2 (pfam12867), LpqC (COG3509), RVT-Retrons, WGR_DNA_ligase (cd07998)