myRT

myRT report for GCA_002156785.1_ASM215678v1

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Seq: CP020854.1 Klebsiella pneumoniae strain KPN528 plasmid pKPN528-1, complete sequence (292471 bp)
Overview 1 RT 1: 105129-108989 bp Neighborhood of RT #1 [105129, 108989] HHA RVT-GII INT_Cre_C Feature: gene Location: 105129-105383 bp Ori: ART14238.1 Feature: domain Description: HHA Location: 105180-105363 bp Feature: domain Description: HHA Location: 1 051 80-1 05363 bp Feature: gene Location: 105649-105900 bp Feature: gene Location: 105900-107384 bp Ori: ART14240.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 106302-106992 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 06302-1 06992 bp Feature: gene Location: 107470-108606 bp Ori: ART14241.1 Feature: domain Description: INT_Cre_C Location: 107893-108547 bp Feature: domain Description: INT_Cre_C Location: 1 07893-1 08547 bp Feature: gene Location: 108672-108989 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HHA (pfam05321), RVT-GII, INT_Cre_C (cd00799)

Seq: CP020856.1 Klebsiella pneumoniae strain KPN528 plasmid pKPN528-3, complete sequence (76158 bp)
Overview 1 RT 1: 30842-34596 bp Neighborhood of RT #1 [30842, 34601] PRK10276 RVT-GII ArdC Feature: gene Location: 30842-31273 bp Ori: ART14667.1 Feature: domain Description: PRK10276 Location: 30893-31256 bp Feature: domain Description: PRK102 76 Location: 30893-312 56 bp Feature: gene Location: 31431-31682 bp Feature: gene Location: 31682-33166 bp Ori: ART14669.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32084-32774 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32 084-32 774 bp Feature: gene Location: 33159-33428 bp Feature: gene Location: 33636-34601 bp Ori: ART14671.1 Feature: domain Description: ArdC Location: 33762-34596 bp Feature: domain Description: ArdC Location: 33762 -34596 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, ArdC (COG4227)

Seq: CP020853.1 Klebsiella pneumoniae strain KPN528 chromosome, complete genome (5383018 bp)
Overview 1 RT 1: 2413734-2417842 bp 2 RT 2: 3651418-3654570 bp 3 RT 3: 3846420-3851301 bp 4 RT 4: 4901971-4909352 bp Neighborhood of RT #1 [2413734, 2417844] DinI RVT-GII PRK10276 umuC Neighborhood of RT #2 [3651418, 3654570] PRK10276 RVT-GII Neighborhood of RT #3 [3846420, 3851306] YccC PRK10016 RVT-GII dacD Neighborhood of RT #4 [4901971, 4909369] PRK09692 Integrase_1 RVT-UG4 FimD FimC Feature: gene Location: 2413734-2413976 bp Ori: ART11233.1 Feature: domain Description: DinI Location: 2413785-2413965 bp Feature: domain Description: DinI Location: 2413 785-2413 965 bp Feature: gene Location: 2414343-2414594 bp Feature: gene Location: 2414594-2416078 bp Ori: ART11235.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2414996-2415686 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2414996-2415686 bp Feature: gene Location: 2416157-2416576 bp Ori: ART11236.1 Feature: domain Description: PRK10276 Location: 2416160-2416571 bp Feature: domain Description: PRK10276 Location: 2416160-2416571 bp Feature: gene Location: 2416579-2417844 bp Ori: ART11237.1 Feature: domain Description: umuC Location: 2416582-2417842 bp Feature: domain Description: umuC Location: 2416582-2417842 bp Feature: gene Location: 3651418-3651735 bp Ori: ART12338.1 Feature: domain Description: PRK10276 Location: 3651424-3651541 bp Feature: domain Description: PRK10276 Location: 3 651424-3 651541 bp Feature: gene Location: 3651735-3651974 bp Feature: gene Location: 3652052-3653536 bp Ori: ART12340.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3652454-3653144 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 652454-3 653 144 bp Feature: gene Location: 3653536-3653787 bp Feature: gene Location: 3654241-3654570 bp Feature: gene Location: 3846420-3847478 bp Ori: ART12518.1 Feature: domain Description: YccC Location: 3846426-3847464 bp Feature: domain Description: YccC Location: 3 846426-3 847464 bp Feature: gene Location: 3847577-3848050 bp Ori: ART12519.1 Feature: domain Description: PRK10016 Location: 3847580-3848039 bp Feature: domain Description: PRK10016 Location: 3 847580-3 84803 9 bp Feature: gene Location: 3848132-3849616 bp Ori: ART12520.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3848534-3849224 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 84853 4-3 849224 bp Feature: gene Location: 3849616-3849867 bp Feature: gene Location: 3850137-3851306 bp Ori: ART12522.1 Feature: domain Description: dacD Location: 3850146-3851301 bp Feature: domain Description: dacD Location: 3 850146-3 8513 01 bp Feature: gene Location: 4901971-4903209 bp Feature: domain Description: PRK09692 Location: 4901977-4903159 bp Feature: domain Description: PRK09692 Location: 4901977-4903 159 bp Feature: gene Location: 4903389-4903844 bp Ori: ART13446.1 Feature: domain Description: Integrase_1 Location: 4903392-4903626 bp Feature: domain Description: Integrase_1 Location: 4903 3 92-4903 626 bp Feature: gene Location: 4903886-4905967 bp Ori: ART13447.1 Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 4904297-4904741 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 4904297-4904741 bp Feature: gene Location: 4905964-4908558 bp Ori: ART13448.1 Feature: domain Description: FimD Location: 4906006-4908547 bp Feature: domain Description: FimD Location: 4906006-4908547 bp Feature: gene Location: 4908605-4909369 bp Ori: ART13449.1 Feature: domain Description: FimC Location: 4908650-4909352 bp Feature: domain Description: FimC Location: 4908650-49093 52 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DinI (pfam06183), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609), YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), dacD (PRK11397), PRK09692 (Integrase; provisional), Integrase_1 (pfam12835), RVT-UG4
FimD (COG3188), FimC (COG3121)

Seq: CP020855.1 Klebsiella pneumoniae strain KPN528 plasmid pKPN528-2, complete sequence (221428 bp)
Overview 1 RT 1: 209491-213214 bp Neighborhood of RT #1 [209491, 213216] PRK10276 RVT-GII Antirestrict Feature: gene Location: 209491-209916 bp Ori: ART14603.1 Feature: domain Description: PRK10276 Location: 209494-209902 bp Feature: domain Description: PRK10276 Location: 2094 94 -209902 bp Feature: gene Location: 210071-210322 bp Feature: gene Location: 210322-211806 bp Ori: ART14605.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 210724-211414 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 210724 -2114 14 bp Feature: gene Location: 212040-212270 bp Feature: gene Location: 212791-213216 bp Ori: ART14606.1 Feature: domain Description: Antirestrict Location: 212926-213214 bp Feature: domain Description: Antirestrict Location: 212926-213214 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, Antirestrict (pfam03230)