myRT

myRT report for GCA_002157245.1_ASM215724v1

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Seq: CP021180.1 Escherichia coli strain 81009 plasmid pEC-81009, complete sequence (135720 bp)
Overview 1 RT 1: 3598-6279 bp 2 RT 2: 16618-20406 bp Neighborhood of RT #1 [3598, 6281] PRK10173 PRK10173 RVT-GII PHA02517 InsE Neighborhood of RT #2 [16618, 20444] InsE PHA02517 RVT-GII GIIM PHA02517 InsE Feature: gene Location: 3598-4047 bp Ori: ART46090.1 Gene: agp_2 Feature: domain Description: PRK10173 Location: 3601-4039 bp Feature: domain Description: PRK1 01 73 Location: 3601 -4039 bp Feature: gene Location: 4022-4342 bp Ori: ART46091.1 Gene: agp_3 Feature: domain Description: PRK10173 Location: 4025-4253 bp Feature: domain Description: PRK1 01 73 Location: 4025-4253 bp Feature: gene Location: 4381-4884 bp Ori: ART46092.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4654-4726 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4654-4726 bp Feature: gene Location: 5476-5955 bp Ori: ART46093.1 Gene: insO-1_1 Feature: domain Description: PHA02517 Location: 5536-5890 bp Feature: domain Description: PHA0251 7 Location: 5536-5890 bp Feature: gene Location: 5955-6281 bp Ori: ART46094.1 Feature: domain Description: InsE Location: 5958-6279 bp Feature: domain Description: InsE Location: 5958-6279 bp Feature: gene Location: 16618-16944 bp Ori: ART46107.1 Feature: domain Description: InsE Location: 16621-16942 bp Feature: domain Description: InsE Location: 1 6621 -1 6942 bp Feature: gene Location: 16944-17423 bp Ori: ART46108.1 Gene: insO-1_2 Feature: domain Description: PHA02517 Location: 17004-17358 bp Feature: domain Description: PHA0251 7 Location: 1 7004-1 7358 bp Feature: gene Location: 18015-19538 bp Ori: ART46109.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18288-19020 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 8288-1 9020 bp Feature: domain Description: GIIM Note: maturase Location: 19095-19293 bp Feature: domain Description: GIIM Note: maturase Location: 1 9095-1 9293 bp Feature: gene Location: 19655-20011 bp Ori: ART46110.1 Gene: insF-1_5 Feature: domain Description: PHA02517 Location: 19658-19967 bp Feature: domain Description: PHA0251 7 Location: 1 9658-1 9967 bp Feature: gene Location: 20040-20444 bp Ori: ART46111.1 Gene: insC-1_3 Feature: domain Description: InsE Location: 20070-20406 bp Feature: domain Description: InsE Location: 20070-20406 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10173 (glucose-1-phosphatase/inositol phosphatase; Provisional), RVT-GII, PHA02517 (putative transposase OrfB; Reviewed), InsE (COG2963), GIIM (pfam08388)

Seq: CP021179.1 Escherichia coli strain 81009 chromosome, complete genome (5012084 bp)
Overview 1 RT 1: 3368100-3374434 bp Neighborhood of RT #1 [3368100, 3374442] RVT-Retrons PRK11388 Feature: gene Location: 3368100-3369227 bp Feature: gene Location: 3369285-3369452 bp Feature: gene Location: 3369474-3371231 bp Ori: ART44535.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3369618-3370236 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3369618-33702 36 bp Feature: gene Location: 3371802-3372041 bp Feature: gene Location: 3372523-3374442 bp Ori: ART44537.1 Gene: dhaR Feature: domain Description: PRK11388 Location: 3372526-3374434 bp Feature: domain Description: PRK11388 Location: 3372 52 6-3374434 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, PRK11388 (DNA-binding transcriptional regulator DhaR; Provisional)