myRT

myRT report for GCA_002180075.1_ASM218007v1

Download annotations/find similar RTs

Seq: CP021539.1 Klebsiella pneumoniae strain AR_0047, complete genome (5402261 bp)
Overview 1 RT 1: 1784604-1787067 bp 2 RT 2: 2225908-2229906 bp 3 RT 3: 2569811-2573919 bp 4 RT 4: 2753325-2759803 bp 5 RT 5: 3995695-4000576 bp 6 RT 6: 4568745-4572536 bp Neighborhood of RT #1 [1784604, 1787067] RVT-GII Neighborhood of RT #2 [2225908, 2229906] int RVT-GII Neighborhood of RT #3 [2569811, 2573921] DinI RVT-GII PRK10276 umuC Neighborhood of RT #4 [2753325, 2759805] XerC RVT-GII RVT-GII PRK10276 umuC Neighborhood of RT #5 [3995695, 4000581] YccC PRK10016 RVT-GII dacD Neighborhood of RT #6 [4568745, 4573390] RVT-GII Phage_GPA Feature: gene Location: 1784604-1784813 bp Feature: gene Location: 1785015-1785266 bp Feature: gene Location: 1785266-1786750 bp Ori: ARW97179.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1785668-1786358 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 785668-1 786358 bp Feature: gene Location: 1786743-1786814 bp Feature: gene Location: 1786828-1787067 bp Feature: gene Location: 2225908-2226888 bp Ori: ARW97586.1 Feature: domain Description: int Location: 2225911-2226838 bp Feature: domain Description: int Location: 222591 1 -2226838 bp Feature: gene Location: 2227128-2227379 bp Feature: gene Location: 2227379-2228863 bp Ori: ARW97588.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2227781-2228471 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2227781 -2228471 bp Feature: gene Location: 2228856-2228924 bp Feature: gene Location: 2228962-2229906 bp Feature: gene Location: 2569811-2570053 bp Ori: ARW97914.1 Feature: domain Description: DinI Location: 2569862-2570042 bp Feature: domain Description: DinI Location: 2569862-2570042 bp Feature: gene Location: 2570420-2570671 bp Feature: gene Location: 2570671-2572155 bp Ori: ARW97916.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2571073-2571763 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2571 073-2571 763 bp Feature: gene Location: 2572234-2572653 bp Ori: ARW97917.1 Feature: domain Description: PRK10276 Location: 2572237-2572648 bp Feature: domain Description: PRK1 0276 Location: 2572237-2572648 bp Feature: gene Location: 2572656-2573921 bp Ori: ARW97918.1 Feature: domain Description: umuC Location: 2572659-2573919 bp Feature: domain Description: umuC Location: 2572659-257391 9 bp Feature: gene Location: 2753325-2753747 bp Ori: ARW98111.1 Feature: domain Description: XerC Location: 2753361-2753706 bp Feature: domain Description: XerC Location: 2753361 -2753706 bp Feature: gene Location: 2754394-2754645 bp Feature: gene Location: 2754645-2756129 bp Ori: ARW98113.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2755047-2755737 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2755047-2755737 bp Feature: gene Location: 2756207-2756422 bp Feature: gene Location: 2756555-2758039 bp Ori: ARW98114.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2756957-2757647 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2756957-2757647 bp Feature: gene Location: 2758119-2758538 bp Ori: ARX00805.1 Feature: domain Description: PRK10276 Location: 2758122-2758533 bp Feature: domain Description: PRK1 0276 Location: 27581 22-2758533 bp Feature: gene Location: 2758540-2759805 bp Ori: ARW98115.1 Feature: domain Description: umuC Location: 2758543-2759803 bp Feature: domain Description: umuC Location: 2758543-2759803 bp Feature: gene Location: 3995695-3996753 bp Ori: ARW99329.1 Feature: domain Description: YccC Location: 3995701-3996739 bp Feature: domain Description: YccC Location: 3995701 -3996739 bp Feature: gene Location: 3996852-3997325 bp Ori: ARW99330.1 Feature: domain Description: PRK10016 Location: 3996855-3997314 bp Feature: domain Description: PRK1 001 6 Location: 3996855-399731 4 bp Feature: gene Location: 3997407-3998891 bp Ori: ARW99331.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3997809-3998499 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3997809-3998499 bp Feature: gene Location: 3998891-3999142 bp Feature: gene Location: 3999412-4000581 bp Ori: ARW99333.1 Feature: domain Description: dacD Location: 3999421-4000576 bp Feature: domain Description: dacD Location: 3999421 -4000576 bp Feature: gene Location: 4568745-4568933 bp Feature: gene Location: 4568983-4569048 bp Feature: gene Location: 4569041-4570525 bp Ori: ARW99838.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4569443-4570133 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4569443-45701 33 bp Feature: gene Location: 4570525-4570776 bp Feature: gene Location: 4571006-4573390 bp Ori: ARW99840.1 Feature: domain Description: Phage_GPA Location: 4571570-4572536 bp Feature: domain Description: Phage_GPA Location: 4571 570-4572536 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, int (PHA02601), DinI (pfam06183), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609), XerC (COG4973), YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), dacD (PRK11397), Phage_GPA (pfam05840)

Seq: CP021541.1 Klebsiella pneumoniae strain AR_0047 plasmid tig00000002, complete sequence (111531 bp)
Overview 1 RT 1: 9581-12693 bp Neighborhood of RT #1 [9581, 12716] RVT-GII StbA Feature: gene Location: 9581-9696 bp Feature: gene Location: 9761-10012 bp Feature: gene Location: 10012-11496 bp Ori: ARX01159.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10414-11104 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10414-11104 bp Feature: gene Location: 11489-11614 bp Feature: gene Location: 11745-12716 bp Ori: ARX01160.1 Feature: domain Description: StbA Location: 11748-12693 bp Feature: domain Description: StbA Location: 11748-12 693 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, StbA (pfam06406)

Seq: CP021540.1 Klebsiella pneumoniae strain AR_0047 plasmid tig00000001, complete sequence (201874 bp)
Overview 1 RT 1: 169436-173147 bp Neighborhood of RT #1 [169436, 173161] Antirestrict RVT-GII PRK10276 Feature: gene Location: 169436-169861 bp Ori: ARX01105.1 Feature: domain Description: Antirestrict Location: 169571-169859 bp Feature: domain Description: Antirestrict Location: 169571-169859 bp Feature: gene Location: 170382-170612 bp Feature: gene Location: 170846-172330 bp Ori: ARX01107.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 171248-171938 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 171248-17193 8 bp Feature: gene Location: 172330-172581 bp Feature: gene Location: 172736-173161 bp Ori: ARX01109.1 Feature: domain Description: PRK10276 Location: 172739-173147 bp Feature: domain Description: PRK10276 Location: 17273 9-173 147 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Antirestrict (pfam03230), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)