myRT

myRT report for GCA_002180175.1_ASM218017v1

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Seq: CP021685.1 Klebsiella pneumoniae strain AR_0146, complete genome (5375740 bp)
Overview 1 RT 1: 317172-322047 bp 2 RT 2: 356100-361053 bp 3 RT 3: 3459816-3462495 bp 4 RT 4: 3902539-3907401 bp 5 RT 5: 4245830-4249938 bp Neighborhood of RT #1 [317172, 322052] YccC PRK10016 RVT-GII dacD Neighborhood of RT #2 [356100, 361085] GT4_WbaZ-like NolL RVT-GII GT4_MtfB-like Neighborhood of RT #3 [3459816, 3462596] RVT-GII PRK10276 PRK10276 Neighborhood of RT #4 [3902539, 3907427] int RVT-GII Phage_CI_repr Phage_CI_repr Phage_CI_C Neighborhood of RT #5 [4245830, 4249940] DinI RVT-GII PRK10276 umuC Feature: gene Location: 317172-318230 bp Ori: ARX17627.1 Feature: domain Description: YccC Location: 317178-318216 bp Feature: domain Description: YccC Location: 31 71 78-31 821 6 bp Feature: gene Location: 318329-318802 bp Ori: ARX17628.1 Feature: domain Description: PRK10016 Location: 318332-318791 bp Feature: domain Description: PRK1 001 6 Location: 31 8332-31 8791 bp Feature: gene Location: 318884-320368 bp Ori: ARX17629.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 319286-319976 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31 9286-31 9976 bp Feature: gene Location: 320368-320619 bp Feature: gene Location: 320889-322052 bp Ori: ARX17631.1 Feature: domain Description: dacD Location: 320892-322047 bp Feature: domain Description: dacD Location: 320892-322047 bp Feature: gene Location: 356100-357113 bp Ori: ARX17658.1 Feature: domain Description: GT4_WbaZ-like Location: 356472-356832 bp Feature: domain Description: GT4_WbaZ-like Location: 356472-356832 bp Feature: gene Location: 357133-358143 bp Feature: domain Description: NolL Location: 357145-358108 bp Feature: domain Description: NolL Location: 3571 45-3581 08 bp Feature: gene Location: 358236-359720 bp Ori: ARX17659.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 358638-359328 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 358638-359328 bp Feature: gene Location: 359720-359971 bp Feature: gene Location: 360093-361085 bp Ori: ARX17661.1 Feature: domain Description: GT4_MtfB-like Location: 360252-361053 bp Feature: domain Description: GT4_MtfB-like Location: 360252-361 053 bp Feature: gene Location: 3459816-3460025 bp Feature: gene Location: 3460227-3460478 bp Feature: gene Location: 3460478-3461962 bp Ori: ARX20533.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3460880-3461570 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3460880-3461 570 bp Feature: gene Location: 3462040-3462279 bp Feature: gene Location: 3462279-3462596 bp Ori: ARX20535.1 Feature: domain Description: PRK10276 Location: 3462285-3462399 bp Feature: domain Description: PRK1 0276 Location: 3462285-3462399 bp Feature: domain Description: PRK10276 Location: 3462426-3462495 bp Feature: domain Description: PRK1 0276 Location: 3462426-3462495 bp Feature: gene Location: 3902539-3903591 bp Ori: ARX20932.1 Feature: domain Description: int Location: 3902542-3903541 bp Feature: domain Description: int Location: 3902542-3903541 bp Feature: gene Location: 3903759-3904010 bp Feature: gene Location: 3904010-3905494 bp Ori: ARX20934.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3904412-3905102 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 390441 2-39051 02 bp Feature: gene Location: 3905593-3906537 bp Feature: gene Location: 3906549-3907427 bp Ori: ARX20936.1 Feature: domain Description: Phage_CI_repr Location: 3906576-3906759 bp Feature: domain Description: Phage_CI_repr Location: 3906576-3906759 bp Feature: domain Description: Phage_CI_repr Location: 3906888-3907080 bp Feature: domain Description: Phage_CI_repr Location: 3906888-3907080 bp Feature: domain Description: Phage_CI_C Location: 3907107-3907401 bp Feature: domain Description: Phage_CI_C Location: 39071 07-3907401 bp Feature: gene Location: 4245830-4246072 bp Ori: ARX21252.1 Feature: domain Description: DinI Location: 4245881-4246061 bp Feature: domain Description: DinI Location: 4245881 -4246061 bp Feature: gene Location: 4246439-4246690 bp Feature: gene Location: 4246690-4248174 bp Ori: ARX21254.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4247092-4247782 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4247092-4247782 bp Feature: gene Location: 4248253-4248672 bp Ori: ARX21255.1 Feature: domain Description: PRK10276 Location: 4248256-4248667 bp Feature: domain Description: PRK1 0276 Location: 4248256-4248667 bp Feature: gene Location: 4248675-4249940 bp Ori: ARX21256.1 Feature: domain Description: umuC Location: 4248678-4249938 bp Feature: domain Description: umuC Location: 4248678-4249938 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), RVT-GII, dacD (PRK11397), GT4_WbaZ-like (cd03804), NolL (COG3594), GT4_MtfB-like (cd03809), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), int (PHA02601), Phage_CI_repr (pfam07022)
Phage_CI_C (pfam16452), DinI (pfam06183), umuC (PRK03609)

Seq: CP021688.1 Klebsiella pneumoniae strain AR_0146 plasmid tig00001189, complete sequence (90199 bp)
Overview 1 RT 1: 59590-63344 bp Neighborhood of RT #1 [59590, 63349] PRK10276 RVT-GII ArdC Feature: gene Location: 59590-60021 bp Ori: ARX22830.1 Feature: domain Description: PRK10276 Location: 59641-60004 bp Feature: domain Description: PRK102 76 Location: 59641-60004 bp Feature: gene Location: 60179-60430 bp Feature: gene Location: 60430-61914 bp Ori: ARX22832.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 60832-61522 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 60832 -6152 2 bp Feature: gene Location: 61907-62176 bp Feature: gene Location: 62384-63349 bp Ori: ARX22834.1 Feature: domain Description: ArdC Location: 62510-63344 bp Feature: domain Description: ArdC Location: 62 510-63344 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, ArdC (COG4227)

Seq: CP021686.1 Klebsiella pneumoniae strain AR_0146 plasmid tig00001160, complete sequence (183376 bp)
Overview 1 RT 1: 34463-38174 bp Neighborhood of RT #1 [34463, 38188] Antirestrict RVT-GII PRK10276 Feature: gene Location: 34463-34888 bp Ori: ARX22541.1 Feature: domain Description: Antirestrict Location: 34598-34886 bp Feature: domain Description: Antirestrict Location: 3 4598-3 4886 bp Feature: gene Location: 35409-35639 bp Feature: gene Location: 35873-37357 bp Ori: ARX22542.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 36275-36965 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 6275-3 6965 bp Feature: gene Location: 37357-37608 bp Feature: gene Location: 37763-38188 bp Ori: ARX22544.1 Feature: domain Description: PRK10276 Location: 37766-38174 bp Feature: domain Description: PRK10276 Location: 3 7766-3 8174 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Antirestrict (pfam03230), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)