myRT

myRT report for GCA_002180215.1_ASM218021v1

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Seq: CP021691.1 Escherichia coli strain AR_0151, complete genome (4862952 bp)
Overview 1 RT 1: 1053535-1056560 bp 2 RT 2: 1358712-1363003 bp 3 RT 3: 3295435-3300138 bp 4 RT 4: 4248315-4251250 bp 5 RT 5: 4706297-4709459 bp 6 RT 6: 4721975-4729038 bp Neighborhood of RT #1 [1053535, 1056565] RVT-GII GIIM PHA02517 DUF1016_N Neighborhood of RT #2 [1358712, 1363003] YesM RVT-GII GIIM RVT-GII Neighborhood of RT #3 [3295435, 3300138] RVT-GII GIIM PHA02517 Neighborhood of RT #4 [4248315, 4251250] RVT-GII GIIM PHA02517 Neighborhood of RT #5 [4706297, 4709459] COG2085 PHA02517 RVT-GII GIIM Neighborhood of RT #6 [4721975, 4729145] RVT-GII GIIM PHA02517 Arm-DNA-bind_3 RVT-Retrons PRK09678 Feature: gene Location: 1053535-1053906 bp Feature: gene Location: 1053821-1054246 bp Feature: gene Location: 1054200-1055723 bp Ori: ARX28814.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1054473-1055205 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 054473-1 055205 bp Feature: domain Description: GIIM Note: maturase Location: 1055280-1055478 bp Feature: domain Description: GIIM Note: maturase Location: 1 055280-1 055478 bp Feature: gene Location: 1055807-1056286 bp Feature: domain Description: PHA02517 Location: 1055810-1056284 bp Feature: domain Description: PHA0251 7 Location: 1 05581 0-1 056284 bp Feature: gene Location: 1056326-1056565 bp Ori: ARX28815.1 Feature: domain Description: DUF1016_N Location: 1056383-1056560 bp Feature: domain Description: DUF1 01 6_N Location: 1 056383-1 056560 bp Feature: gene Location: 1358712-1359941 bp Ori: ARX29108.1 Feature: domain Description: YesM Location: 1359192-1359933 bp Feature: domain Description: YesM Location: 1 3591 92-1 359933 bp Feature: gene Location: 1360014-1360202 bp Feature: gene Location: 1360524-1361045 bp Ori: ARX29110.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1360530-1360812 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 360530-1 36081 2 bp Feature: domain Description: GIIM Note: maturase Location: 1360860-1361040 bp Feature: domain Description: GIIM Note: maturase Location: 1 360860-1 361 040 bp Feature: gene Location: 1361073-1361612 bp Ori: ARX29111.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1361403-1361481 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 361 403-1 361 481 bp Feature: gene Location: 1361837-1362124 bp Feature: gene Location: 1362098-1363003 bp Feature: gene Location: 3295435-3295806 bp Feature: gene Location: 3295721-3296146 bp Feature: gene Location: 3296100-3297623 bp Ori: ARX30836.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3296373-3297105 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3296373-32971 05 bp Feature: domain Description: GIIM Note: maturase Location: 3297180-3297378 bp Feature: domain Description: GIIM Note: maturase Location: 32971 80-3297378 bp Feature: gene Location: 3297707-3298186 bp Feature: domain Description: PHA02517 Location: 3297710-3298184 bp Feature: domain Description: PHA0251 7 Location: 329771 0-32981 84 bp Feature: gene Location: 3298228-3300138 bp Feature: gene Location: 4248315-4248686 bp Feature: gene Location: 4248601-4249026 bp Feature: gene Location: 4248980-4250503 bp Ori: ARX31721.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4249253-4249985 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4249253-4249985 bp Feature: domain Description: GIIM Note: maturase Location: 4250060-4250258 bp Feature: domain Description: GIIM Note: maturase Location: 4250060-4250258 bp Feature: gene Location: 4250587-4251066 bp Feature: domain Description: PHA02517 Location: 4250590-4251064 bp Feature: domain Description: PHA0251 7 Location: 4250590-4251 064 bp Feature: gene Location: 4251032-4251250 bp Feature: gene Location: 4706297-4706710 bp Ori: ARX32135.1 Feature: domain Description: COG2085 Location: 4706396-4706543 bp Feature: domain Description: COG2085 Location: 4706396-4706543 bp Feature: gene Location: 4706637-4707124 bp Feature: domain Description: PHA02517 Location: 4706640-4706811 bp Feature: domain Description: PHA0251 7 Location: 4706640-470681 1 bp Feature: gene Location: 4707205-4708728 bp Ori: ARX32136.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4707478-4708210 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4707478-470821 0 bp Feature: domain Description: GIIM Note: maturase Location: 4708285-4708483 bp Feature: domain Description: GIIM Note: maturase Location: 4708285-4708483 bp Feature: gene Location: 4708682-4709107 bp Feature: gene Location: 4709022-4709459 bp Feature: gene Location: 4721975-4722346 bp Feature: gene Location: 4722261-4722686 bp Feature: gene Location: 4722640-4724163 bp Ori: ARX32149.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4722913-4723645 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 472291 3-4723645 bp Feature: domain Description: GIIM Note: maturase Location: 4723720-4723918 bp Feature: domain Description: GIIM Note: maturase Location: 4723720-472391 8 bp Feature: gene Location: 4724247-4724726 bp Feature: domain Description: PHA02517 Location: 4724250-4724724 bp Feature: domain Description: PHA0251 7 Location: 4724250-4724724 bp Feature: gene Location: 4724957-4725870 bp Feature: domain Description: Arm-DNA-bind_3 Location: 4724966-4725218 bp Feature: domain Description: Arm-DNA-bind_3 Location: 4724966-472521 8 bp Feature: gene Location: 4726325-4727257 bp Ori: ARX32150.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4726427-4727021 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4726427-4727021 bp Feature: gene Location: 4727259-4728227 bp Feature: gene Location: 4728873-4729145 bp Ori: ARX32152.1 Feature: domain Description: PRK09678 Location: 4728882-4729038 bp Feature: domain Description: PRK09678 Location: 4728882-4729038 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed), DUF1016_N (pfam17761), YesM (COG2972), COG2085 (Predicted dinucleotide-binding enzyme ), Arm-DNA-bind_3 (pfam13356), RVT-Retrons, PRK09678 (DNA-binding transcriptional regulator; Provisional)