myRT

myRT report for GCA_002180255.1_ASM218025v1

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Seq: CP021699.1 Klebsiella pneumoniae strain AR_0158 plasmid tig00000727, complete sequence (354705 bp)
Overview 1 RT 1: 300816-304617 bp Neighborhood of RT #1 [300816, 305041] INT_Cre_C RVT-GII InsA Feature: gene Location: 300816-301133 bp Feature: gene Location: 301199-302335 bp Ori: ARX42214.1 Feature: domain Description: INT_Cre_C Location: 301622-302276 bp Feature: domain Description: INT_Cre_C Location: 301 622-302276 bp Feature: gene Location: 302421-303905 bp Ori: ARX42215.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 302823-303513 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 302823-30351 3 bp Feature: gene Location: 304038-304409 bp Feature: gene Location: 304344-305041 bp Feature: domain Description: InsA Location: 304350-304617 bp Feature: domain Description: InsA Location: 304350-30461 7 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_Cre_C (cd00799), RVT-GII, InsA (COG3677)

Seq: CP021698.1 Klebsiella pneumoniae strain AR_0158 plasmid tig00000183, complete sequence (87411 bp)
Overview 1 RT 1: 64300-67775 bp Neighborhood of RT #1 [64300, 67792] Rep_3 Zn_Tnp_IS1 HTH_Tnp_IS1 DDE_Tnp_IS1 RVT-GII PRK10276 Feature: gene Location: 64300-64608 bp Feature: domain Description: Rep_3 Location: 64306-64570 bp Feature: domain Description: Rep_3 Location: 64306-64570 bp Feature: gene Location: 64618-65316 bp Feature: domain Description: Zn_Tnp_IS1 Location: 64624-64726 bp Feature: domain Description: Zn_Tnp_IS1 Location: 6462 4-6472 6 bp Feature: domain Description: HTH_Tnp_IS1 Location: 64747-64879 bp Feature: domain Description: HTH_Tnp_IS1 Location: 64747-64879 bp Feature: domain Description: DDE_Tnp_IS1 Location: 64954-65314 bp Feature: domain Description: DDE_Tnp_IS1 Location: 64954-65314 bp Feature: gene Location: 65468-66877 bp Ori: ARX41927.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 65795-66485 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 65795-66485 bp Feature: gene Location: 66952-67203 bp Feature: gene Location: 67361-67792 bp Ori: ARX41929.1 Feature: domain Description: PRK10276 Location: 67412-67775 bp Feature: domain Description: PRK102 76 Location: 67412 -67775 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Rep_3 (pfam01051), Zn_Tnp_IS1 (pfam03811), HTH_Tnp_IS1 (pfam12759), DDE_Tnp_IS1 (pfam03400), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)

Seq: CP021697.1 Klebsiella pneumoniae strain AR_0158 plasmid tig00000161, complete sequence (191266 bp)
Overview 1 RT 1: 42880-46708 bp Neighborhood of RT #1 [42880, 46728] INT_Cre_C RVT-GII HHA Feature: gene Location: 42880-43197 bp Feature: gene Location: 43263-44399 bp Ori: ARX41737.1 Feature: domain Description: INT_Cre_C Location: 43686-44340 bp Feature: domain Description: INT_Cre_C Location: 43 686-443 40 bp Feature: gene Location: 44485-45970 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 44887-45421 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 44887-45421 bp Feature: gene Location: 45970-46182 bp Feature: gene Location: 46474-46728 bp Ori: ARX41739.1 Feature: domain Description: HHA Location: 46525-46708 bp Feature: domain Description: HHA Location: 46525-46708 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_Cre_C (cd00799), RVT-GII, HHA (pfam05321)

Seq: CP021696.1 Klebsiella pneumoniae strain AR_0158, complete genome (5165071 bp)
Overview 1 RT 1: 596562-600669 bp 2 RT 2: 765378-773706 bp 3 RT 3: 4753364-4761331 bp Neighborhood of RT #1 [596562, 600671] DinI RVT-GII PRK10276 umuC Neighborhood of RT #2 [765378, 773708] RVT-GII XerC RVT-GII PRK10276 umuC Neighborhood of RT #3 [4753364, 4761366] DEXQc_UvrD UvrD_C RVT-Retrons PRK09692 proA Feature: gene Location: 596562-596804 bp Ori: ARX37355.1 Feature: domain Description: DinI Location: 596613-596793 bp Feature: domain Description: DinI Location: 596613-596793 bp Feature: gene Location: 597170-597421 bp Feature: gene Location: 597421-598905 bp Ori: ARX37357.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 597823-598513 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 597823-598513 bp Feature: gene Location: 598984-599403 bp Ori: ARX37358.1 Feature: domain Description: PRK10276 Location: 598987-599398 bp Feature: domain Description: PRK10276 Location: 598987-599398 bp Feature: gene Location: 599406-600671 bp Ori: ARX37359.1 Feature: domain Description: umuC Location: 599409-600669 bp Feature: domain Description: umuC Location: 5994 09-600669 bp Feature: gene Location: 765378-766301 bp Feature: gene Location: 766834-767085 bp Feature: gene Location: 767085-768569 bp Ori: ARX37534.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 767487-768177 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7674 87-768177 bp Feature: gene Location: 768643-768879 bp Feature: gene Location: 769141-769563 bp Ori: ARX37535.1 Feature: domain Description: XerC Location: 769216-769522 bp Feature: domain Description: XerC Location: 769216-769522 bp Feature: gene Location: 770207-770458 bp Feature: gene Location: 770458-771942 bp Ori: ARX37537.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 770860-771550 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 770860-771550 bp Feature: gene Location: 772022-772441 bp Ori: ARX41563.1 Feature: domain Description: PRK10276 Location: 772025-772436 bp Feature: domain Description: PRK10276 Location: 772025-7724 36 bp Feature: gene Location: 772443-773708 bp Ori: ARX37538.1 Feature: domain Description: umuC Location: 772446-773706 bp Feature: domain Description: umuC Location: 7724 4 6-773706 bp Feature: gene Location: 4753364-4753774 bp Feature: gene Location: 4753753-4755537 bp Ori: ARX41162.1 Feature: domain Description: DEXQc_UvrD Location: 4753795-4754641 bp Feature: domain Description: DEXQc_UvrD Location: 4 753795-4 754 64 1 bp Feature: domain Description: UvrD_C Location: 4755277-4755469 bp Feature: domain Description: UvrD_C Location: 4 755277-4 7554 69 bp Feature: gene Location: 4757238-4758398 bp Ori: ARX41163.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4757481-4758129 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4 7574 81-4 758129 bp Feature: gene Location: 4758564-4759760 bp Ori: ARX41164.1 Feature: domain Description: PRK09692 Location: 4758573-4759728 bp Feature: domain Description: PRK09692 Location: 4 758573-4 759728 bp Feature: gene Location: 4760113-4761366 bp Ori: ARX41165.1 Feature: domain Description: proA Location: 4760140-4761331 bp Feature: domain Description: proA Location: 4 76014 0-4 761331 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DinI (pfam06183), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609), XerC (COG4973), DEXQc_UvrD (cd17932), UvrD_C (pfam13361), RVT-Retrons, PRK09692 (Integrase; provisional), proA (TIGR00407)