myRT

myRT report for GCA_002180315.1_ASM218031v1

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Seq: CP021708.1 Klebsiella pneumoniae strain AR_0143, complete genome (5439290 bp)
Overview 1 RT 1: 13094-16830 bp 2 RT 2: 286385-289341 bp 3 RT 3: 592288-597154 bp 4 RT 4: 789032-791990 bp 5 RT 5: 2015006-2019105 bp 6 RT 6: 4928486-4935834 bp Neighborhood of RT #1 [13094, 16830] DUF551 RVT-GII PRK10597 Neighborhood of RT #2 [286385, 289544] RVT-GII PRK10276 Neighborhood of RT #3 [592288, 597168] dacD RVT-GII PRK10016 YccC Neighborhood of RT #4 [789032, 792184] RVT-GII PRK10276 Neighborhood of RT #5 [2015006, 2019116] umuC PRK10276 RVT-GII DinI Neighborhood of RT #6 [4928486, 4935884] FimC FimD RVT-UG4 Integrase_1 PRK09692 Feature: gene Location: 13094-13570 bp Ori: ARX42325.1 Feature: domain Description: DUF551 Location: 13355-13553 bp Feature: domain Description: DUF551 Location: 1 3355-1 3553 bp Feature: gene Location: 14331-14546 bp Feature: gene Location: 14679-16163 bp Ori: ARX42326.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15081-15771 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 5081 -1 5771 bp Feature: gene Location: 16242-16475 bp Ori: ARX42327.1 Feature: domain Description: PRK10597 Location: 16245-16470 bp Feature: domain Description: PRK1 0597 Location: 1 6245-1 6470 bp Feature: gene Location: 16582-16830 bp Feature: gene Location: 286385-286714 bp Feature: gene Location: 287168-287419 bp Feature: gene Location: 287419-288903 bp Ori: ARX42599.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 287821-288511 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 287821 -28851 1 bp Feature: gene Location: 288977-289216 bp Feature: gene Location: 289173-289544 bp Ori: ARX42601.1 Feature: domain Description: PRK10276 Location: 289218-289341 bp Feature: domain Description: PRK1 0276 Location: 28921 8-289341 bp Feature: gene Location: 592288-593451 bp Ori: ARX47296.1 Feature: domain Description: dacD Location: 592291-593446 bp Feature: domain Description: dacD Location: 592291 -593446 bp Feature: gene Location: 593721-593972 bp Feature: gene Location: 593972-595456 bp Ori: ARX42848.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 594374-595064 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 594374-595064 bp Feature: gene Location: 595538-596011 bp Ori: ARX42849.1 Feature: domain Description: PRK10016 Location: 595541-596000 bp Feature: domain Description: PRK1 001 6 Location: 595541 -596000 bp Feature: gene Location: 596110-597168 bp Ori: ARX42850.1 Feature: domain Description: YccC Location: 596116-597154 bp Feature: domain Description: YccC Location: 5961 1 6-5971 54 bp Feature: gene Location: 789032-789361 bp Feature: gene Location: 789815-790066 bp Feature: gene Location: 790066-791550 bp Ori: ARX43034.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 790468-791158 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 790468-791 1 58 bp Feature: gene Location: 791628-791867 bp Feature: gene Location: 791867-792184 bp Ori: ARX43036.1 Feature: domain Description: PRK10276 Location: 791873-791990 bp Feature: domain Description: PRK1 0276 Location: 791 873-791 990 bp Feature: gene Location: 2015006-2016271 bp Ori: ARX44176.1 Feature: domain Description: umuC Location: 2015009-2016269 bp Feature: domain Description: umuC Location: 201 5009-201 6269 bp Feature: gene Location: 2016274-2016693 bp Ori: ARX44177.1 Feature: domain Description: PRK10276 Location: 2016277-2016688 bp Feature: domain Description: PRK1 0276 Location: 201 6277-201 6688 bp Feature: gene Location: 2016772-2018256 bp Ori: ARX44178.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2017174-2017864 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 201 71 74-201 7864 bp Feature: gene Location: 2018256-2018507 bp Feature: gene Location: 2018874-2019116 bp Ori: ARX44180.1 Feature: domain Description: DinI Location: 2018925-2019105 bp Feature: domain Description: DinI Location: 201 8925-201 91 05 bp Feature: gene Location: 4928486-4929250 bp Ori: ARX46797.1 Feature: domain Description: FimC Location: 4928531-4929233 bp Feature: domain Description: FimC Location: 4928531 -4929233 bp Feature: gene Location: 4929297-4931891 bp Ori: ARX46798.1 Feature: domain Description: FimD Location: 4929339-4931880 bp Feature: domain Description: FimD Location: 4929339-4931 880 bp Feature: gene Location: 4931888-4933969 bp Ori: ARX46799.1 Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 4932299-4932743 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 4932299-4932743 bp Feature: gene Location: 4934011-4934466 bp Ori: ARX46800.1 Feature: domain Description: Integrase_1 Location: 4934014-4934248 bp Feature: domain Description: Integrase_1 Location: 493401 4-4934248 bp Feature: gene Location: 4934646-4935884 bp Feature: domain Description: PRK09692 Location: 4934652-4935834 bp Feature: domain Description: PRK09692 Location: 4934652-4935834 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF551 (pfam04448), RVT-GII, PRK10597 (DNA damage-inducible protein I; Provisional), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), dacD (PRK11397), PRK10016 (DNA gyrase inhibitor SbmC), YccC (COG1289), umuC (PRK03609), DinI (pfam06183), FimC (COG3121)
FimD (COG3188), RVT-UG4, Integrase_1 (pfam12835), PRK09692 (Integrase; provisional)

Seq: CP021710.1 Klebsiella pneumoniae strain AR_0143 plasmid tig00000853, complete sequence (214114 bp)
Overview 1 RT 1: 171678-175389 bp Neighborhood of RT #1 [171678, 175403] Antirestrict RVT-GII PRK10276 Feature: gene Location: 171678-172103 bp Ori: ARX47818.1 Feature: domain Description: Antirestrict Location: 171813-172101 bp Feature: domain Description: Antirestrict Location: 171813-172 101 bp Feature: gene Location: 172624-172854 bp Feature: gene Location: 173088-174572 bp Ori: ARX47819.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 173490-174180 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 173490-174180 bp Feature: gene Location: 174572-174823 bp Feature: gene Location: 174978-175403 bp Ori: ARX47821.1 Feature: domain Description: PRK10276 Location: 174981-175389 bp Feature: domain Description: PRK102 76 Location: 174981-175389 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Antirestrict (pfam03230), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)

Seq: CP021712.1 Klebsiella pneumoniae strain AR_0143 plasmid tig00000857, complete sequence (70457 bp)
Overview 1 RT 1: 30200-33954 bp Neighborhood of RT #1 [30200, 33959] PRK10276 RVT-GII ArdC Feature: gene Location: 30200-30631 bp Ori: ARX47992.1 Feature: domain Description: PRK10276 Location: 30251-30614 bp Feature: domain Description: PRK10276 Location: 3 0251-3 0614 bp Feature: gene Location: 30789-31040 bp Feature: gene Location: 31040-32524 bp Ori: ARX47994.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31442-32132 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 1442-3 213 2 bp Feature: gene Location: 32517-32786 bp Feature: gene Location: 32994-33959 bp Ori: ARX47996.1 Feature: domain Description: ArdC Location: 33120-33954 bp Feature: domain Description: ArdC Location: 3 3 120-3 3 954 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, ArdC (COG4227)