myRT

myRT report for GCA_002186515.2_ASM218651v2

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Seq: CP037444.1 Klebsiella sp. PO552 plasmid p3, complete sequence (84279 bp)
Overview 1 RT 1: 1596-6237 bp 2 RT 2: 51631-55713 bp Neighborhood of RT #1 [1596, 6239] BetT RVT-GII PRK09928 Neighborhood of RT #2 [51631, 55850] PRK10276 RVT-GII StbA Plasmid_stab_B Plasmid_stab_B Feature: gene Location: 1596-1783 bp Feature: gene Location: 2333-3811 bp Ori: QBL52367.1 Feature: domain Description: BetT Location: 2363-3803 bp Feature: domain Description: BetT Location: 2363-3803 bp Feature: gene Location: 3860-5344 bp Ori: QBL52431.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4262-4952 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4262-4952 bp Feature: gene Location: 5344-5595 bp Feature: gene Location: 5778-6239 bp Ori: QBL52432.1 Feature: domain Description: PRK09928 Location: 5799-6237 bp Feature: domain Description: PRK09928 Location: 5799-6237 bp Feature: gene Location: 51631-52062 bp Ori: QBL52398.1 Gene: umuD Feature: domain Description: PRK10276 Location: 51682-52045 bp Feature: domain Description: PRK1 0276 Location: 51 682-52045 bp Feature: gene Location: 52221-52472 bp Feature: gene Location: 52472-53956 bp Ori: QBL52437.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 52874-53564 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 52874-53564 bp Feature: gene Location: 54205-55176 bp Ori: QBL52400.1 Feature: domain Description: StbA Location: 54208-55153 bp Feature: domain Description: StbA Location: 54208-551 53 bp Feature: gene Location: 55179-55850 bp Ori: QBL52401.1 Feature: domain Description: Plasmid_stab_B Location: 55194-55401 bp Feature: domain Description: Plasmid_stab_B Location: 551 94-55401 bp Feature: domain Description: Plasmid_stab_B Location: 55506-55713 bp Feature: domain Description: Plasmid_stab_B Location: 55506-5571 3 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT BetT (COG1292), RVT-GII, PRK09928 (choline transport protein BetT; Provisional), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), StbA (pfam06406), Plasmid_stab_B (pfam10784)

Seq: CP037441.1 Klebsiella sp. PO552 chromosome, complete genome (5422688 bp)
Overview 1 RT 1: 853155-858792 bp 2 RT 2: 3260645-3264744 bp 3 RT 3: 3295233-3298359 bp Neighborhood of RT #1 [853155, 858792] COG3378 RVT-GII Neighborhood of RT #2 [3260645, 3264755] umuC PRK10276 RVT-GII DinI Neighborhood of RT #3 [3295233, 3298359] PRK10276 RVT-GII Feature: gene Location: 853155-854918 bp Ori: QBL47849.1 Feature: domain Description: COG3378 Location: 853608-854892 bp Feature: domain Description: COG3378 Location: 853608-854892 bp Feature: gene Location: 855102-855353 bp Feature: gene Location: 855353-856837 bp Ori: QBL51844.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 855755-856445 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 855755-856445 bp Feature: gene Location: 857401-858195 bp Feature: gene Location: 858466-858792 bp Feature: gene Location: 3260645-3261910 bp Ori: QBL49929.1 Gene: umuC Feature: domain Description: umuC Location: 3260648-3261908 bp Feature: domain Description: umuC Location: 32 60648-32 61908 bp Feature: gene Location: 3261913-3262332 bp Ori: QBL49930.1 Gene: umuD Feature: domain Description: PRK10276 Location: 3261916-3262327 bp Feature: domain Description: PRK102 76 Location: 32 61916-32 62 32 7 bp Feature: gene Location: 3262412-3263896 bp Ori: QBL51973.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3262814-3263504 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32 62 814-32 63504 bp Feature: gene Location: 3263896-3264147 bp Feature: gene Location: 3264513-3264755 bp Ori: QBL49932.1 Feature: domain Description: DinI Location: 3264564-3264744 bp Feature: domain Description: DinI Location: 32 64564-32 64744 bp Feature: gene Location: 3295233-3295604 bp Ori: QBL49965.1 Feature: domain Description: PRK10276 Location: 3295278-3295440 bp Feature: domain Description: PRK102 76 Location: 32 952 78-32 95440 bp Feature: gene Location: 3295561-3295800 bp Feature: gene Location: 3295878-3297362 bp Ori: QBL51977.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3296280-3296970 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32 962 80-32 96970 bp Feature: gene Location: 3297362-3297613 bp Feature: gene Location: 3298270-3298359 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3378 (Phage- or plasmid-associated DNA primase ), RVT-GII, umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), DinI (pfam06183)

Seq: CP037442.1 Klebsiella sp. PO552 plasmid p1, complete sequence (204467 bp)
Overview 1 RT 1: 189047-192905 bp Neighborhood of RT #1 [189047, 192905] HHA RVT-GII INT_Cre_C Feature: gene Location: 189047-189301 bp Ori: QBL52220.1 Feature: domain Description: HHA Location: 189098-189281 bp Feature: domain Description: HHA Location: 189098-189281 bp Feature: gene Location: 189566-189817 bp Feature: gene Location: 189937-191300 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 190378-190513 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1903 78-190513 bp Feature: gene Location: 191386-192522 bp Ori: QBL52222.1 Feature: domain Description: INT_Cre_C Location: 191809-192463 bp Feature: domain Description: INT_Cre_C Location: 191809-192463 bp Feature: gene Location: 192588-192905 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HHA (pfam05321), RVT-GII, INT_Cre_C (cd00799)