myRT

myRT report for GCA_002192275.1_ASM219227v1

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Seq: CP021734.1 Escherichia coli strain AR_0114 plasmid unitig_2, complete sequence (85195 bp)
Overview 1 RT 1: 7666-11226 bp Neighborhood of RT #1 [7666, 11226] ArdC RVT-GII Feature: gene Location: 7666-8631 bp Ori: ARZ86216.1 Feature: domain Description: ArdC Location: 7792-8626 bp Feature: domain Description: ArdC Location: 7792-8626 bp Feature: gene Location: 8839-9108 bp Feature: gene Location: 9101-10585 bp Ori: ARZ86218.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9503-10193 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9503-1 01 93 bp Feature: gene Location: 10585-10866 bp Feature: gene Location: 10987-11226 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ArdC (COG4227), RVT-GII

Seq: CP021732.1 Escherichia coli strain AR_0114, complete genome (4786118 bp)
Overview 1 RT 1: 1548527-1551546 bp 2 RT 2: 1975191-1980716 bp 3 RT 3: 2159597-2163880 bp 4 RT 4: 3195159-3198184 bp Neighborhood of RT #1 [1548527, 1551603] RVT-GII GIIM PHA02517 SH3_2 SH3_2 Neighborhood of RT #2 [1975191, 1980823] InsE Arm-DNA-bind_3 RVT-Retrons PRK09678 Neighborhood of RT #3 [2159597, 2163888] RVT-GII RVT-GII GIIM YesM Neighborhood of RT #4 [3195159, 3198189] RVT-GII GIIM PHA02517 DUF1016_N Feature: gene Location: 1548527-1548898 bp Feature: gene Location: 1548813-1549238 bp Feature: gene Location: 1549192-1550715 bp Ori: ARZ82962.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1549465-1550197 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1549465-1550197 bp Feature: domain Description: GIIM Note: maturase Location: 1550272-1550470 bp Feature: domain Description: GIIM Note: maturase Location: 15502 72 -1550470 bp Feature: gene Location: 1550799-1551278 bp Feature: domain Description: PHA02517 Location: 1550802-1551276 bp Feature: domain Description: PHA02 517 Location: 1550802 -15512 76 bp Feature: gene Location: 1551321-1551603 bp Feature: domain Description: SH3_2 Location: 1551336-1551399 bp Feature: domain Description: SH3_2 Location: 1551336-1551399 bp Feature: domain Description: SH3_2 Location: 1551429-1551546 bp Feature: domain Description: SH3_2 Location: 155142 9-1551546 bp Feature: gene Location: 1975191-1976404 bp Feature: domain Description: InsE Location: 1975194-1975533 bp Feature: domain Description: InsE Location: 1975194-1975533 bp Feature: gene Location: 1976635-1977548 bp Feature: domain Description: Arm-DNA-bind_3 Location: 1976644-1976896 bp Feature: domain Description: Arm-DNA-bind_3 Location: 1976644-1976896 bp Feature: gene Location: 1978003-1978935 bp Ori: ARZ83328.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1978105-1978699 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1978105-1978699 bp Feature: gene Location: 1978937-1979905 bp Feature: gene Location: 1980551-1980823 bp Ori: ARZ83330.1 Feature: domain Description: PRK09678 Location: 1980560-1980716 bp Feature: domain Description: PRK09678 Location: 1980560-1980716 bp Feature: gene Location: 2159597-2160502 bp Feature: gene Location: 2160476-2160763 bp Feature: gene Location: 2160988-2161527 bp Ori: ARZ83502.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2161318-2161396 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 161318-2 161396 bp Feature: gene Location: 2161555-2162076 bp Ori: ARZ83503.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2161561-2161843 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 161561-2 161843 bp Feature: domain Description: GIIM Note: maturase Location: 2161891-2162071 bp Feature: domain Description: GIIM Note: maturase Location: 2 161891-2 162 071 bp Feature: gene Location: 2162398-2162586 bp Feature: gene Location: 2162659-2163888 bp Ori: ARZ83505.1 Feature: domain Description: YesM Location: 2163139-2163880 bp Feature: domain Description: YesM Location: 2 163139-2 163880 bp Feature: gene Location: 3195159-3195530 bp Feature: gene Location: 3195445-3195870 bp Feature: gene Location: 3195824-3197347 bp Ori: ARZ84446.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3196097-3196829 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3196097-319682 9 bp Feature: domain Description: GIIM Note: maturase Location: 3196904-3197102 bp Feature: domain Description: GIIM Note: maturase Location: 3196904-3197102 bp Feature: gene Location: 3197431-3197910 bp Feature: domain Description: PHA02517 Location: 3197434-3197908 bp Feature: domain Description: PHA02 517 Location: 3197434-3197908 bp Feature: gene Location: 3197950-3198189 bp Ori: ARZ84447.1 Feature: domain Description: DUF1016_N Location: 3198007-3198184 bp Feature: domain Description: DUF1016_N Location: 3198007-3198184 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed), SH3_2 (pfam07653), InsE (COG2963), Arm-DNA-bind_3 (pfam13356), RVT-Retrons, PRK09678 (DNA-binding transcriptional regulator; Provisional), YesM (COG2972), DUF1016_N (pfam17761)