myRT

myRT report for GCA_002192295.1_ASM219229v1

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Seq: CP021736.1 Escherichia coli strain AR_0150, complete genome (4864149 bp)
Overview 1 RT 1: 1013410-1017693 bp 2 RT 2: 1319848-1322878 bp 3 RT 3: 2510219-2517389 bp 4 RT 4: 2529905-2532900 bp 5 RT 5: 2988112-2991047 bp 6 RT 6: 3940424-3945127 bp Neighborhood of RT #1 [1013410, 1017701] RVT-GII RVT-GII GIIM YesM Neighborhood of RT #2 [1319848, 1322878] DUF1016_N PHA02517 RVT-GII GIIM Neighborhood of RT #3 [2510219, 2517389] PRK09678 RVT-Retrons Arm-DNA-bind_3 PHA02517 RVT-GII GIIM Neighborhood of RT #4 [2529905, 2533067] RVT-GII GIIM PHA02517 COG2085 Neighborhood of RT #5 [2988112, 2991047] PHA02517 RVT-GII GIIM Neighborhood of RT #6 [3940424, 3945127] PHA02517 RVT-GII GIIM Feature: gene Location: 1013410-1014315 bp Feature: gene Location: 1014289-1014576 bp Feature: gene Location: 1014801-1015340 bp Ori: ARZ87237.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1015131-1015209 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 01 51 31 -1 01 5209 bp Feature: gene Location: 1015368-1015889 bp Ori: ARZ87238.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1015374-1015656 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 01 5374-1 01 5656 bp Feature: domain Description: GIIM Note: maturase Location: 1015704-1015884 bp Feature: domain Description: GIIM Note: maturase Location: 1 01 5704-1 01 5884 bp Feature: gene Location: 1016211-1016399 bp Feature: gene Location: 1016472-1017701 bp Ori: ARZ90818.1 Feature: domain Description: YesM Location: 1016952-1017693 bp Feature: domain Description: YesM Location: 1 01 6952-1 01 7693 bp Feature: gene Location: 1319848-1320087 bp Ori: ARZ87534.1 Feature: domain Description: DUF1016_N Location: 1319905-1320082 bp Feature: domain Description: DUF1 01 6_N Location: 1 31 9905-1 320082 bp Feature: gene Location: 1320127-1320606 bp Feature: domain Description: PHA02517 Location: 1320130-1320604 bp Feature: domain Description: PHA0251 7 Location: 1 3201 30-1 320604 bp Feature: gene Location: 1320690-1322213 bp Ori: ARZ87535.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1320963-1321695 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 320963-1 321 695 bp Feature: domain Description: GIIM Note: maturase Location: 1321770-1321968 bp Feature: domain Description: GIIM Note: maturase Location: 1 321 770-1 321 968 bp Feature: gene Location: 1322167-1322592 bp Feature: gene Location: 1322507-1322878 bp Feature: gene Location: 2510219-2510491 bp Ori: ARZ88625.1 Feature: domain Description: PRK09678 Location: 2510228-2510384 bp Feature: domain Description: PRK09678 Location: 251 0228-251 0384 bp Feature: gene Location: 2511137-2512105 bp Feature: gene Location: 2512107-2513039 bp Ori: ARZ88627.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2512209-2512803 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 251 2209-251 2803 bp Feature: gene Location: 2513494-2514407 bp Feature: domain Description: Arm-DNA-bind_3 Location: 2513503-2513755 bp Feature: domain Description: Arm-DNA-bind_3 Location: 251 3503-251 3755 bp Feature: gene Location: 2514638-2515117 bp Feature: domain Description: PHA02517 Location: 2514641-2515115 bp Feature: domain Description: PHA0251 7 Location: 251 4641 -251 51 1 5 bp Feature: gene Location: 2515201-2516724 bp Ori: ARZ88628.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2515474-2516206 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 251 5474-251 6206 bp Feature: domain Description: GIIM Note: maturase Location: 2516281-2516479 bp Feature: domain Description: GIIM Note: maturase Location: 251 6281 -251 6479 bp Feature: gene Location: 2516678-2517103 bp Feature: gene Location: 2517018-2517389 bp Feature: gene Location: 2529905-2530342 bp Feature: gene Location: 2530257-2530682 bp Feature: gene Location: 2530636-2532159 bp Ori: ARZ88641.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2530909-2531641 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2530909-2531 641 bp Feature: domain Description: GIIM Note: maturase Location: 2531716-2531914 bp Feature: domain Description: GIIM Note: maturase Location: 2531 71 6-2531 91 4 bp Feature: gene Location: 2532240-2532727 bp Feature: domain Description: PHA02517 Location: 2532243-2532414 bp Feature: domain Description: PHA0251 7 Location: 2532243-253241 4 bp Feature: gene Location: 2532654-2533067 bp Ori: ARZ88642.1 Feature: domain Description: COG2085 Location: 2532753-2532900 bp Feature: domain Description: COG2085 Location: 2532753-2532900 bp Feature: gene Location: 2988112-2988330 bp Feature: gene Location: 2988296-2988775 bp Feature: domain Description: PHA02517 Location: 2988299-2988773 bp Feature: domain Description: PHA0251 7 Location: 2988299-2988773 bp Feature: gene Location: 2988859-2990382 bp Ori: ARZ89051.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2989132-2989864 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 29891 32-2989864 bp Feature: domain Description: GIIM Note: maturase Location: 2989939-2990137 bp Feature: domain Description: GIIM Note: maturase Location: 2989939-29901 37 bp Feature: gene Location: 2990336-2990761 bp Feature: gene Location: 2990676-2991047 bp Feature: gene Location: 3940424-3942334 bp Feature: gene Location: 3942376-3942855 bp Feature: domain Description: PHA02517 Location: 3942379-3942853 bp Feature: domain Description: PHA0251 7 Location: 3942379-3942853 bp Feature: gene Location: 3942939-3944462 bp Ori: ARZ89939.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3943212-3943944 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 394321 2-3943944 bp Feature: domain Description: GIIM Note: maturase Location: 3944019-3944217 bp Feature: domain Description: GIIM Note: maturase Location: 394401 9-394421 7 bp Feature: gene Location: 3944416-3944841 bp Feature: gene Location: 3944756-3945127 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), YesM (COG2972), DUF1016_N (pfam17761), PHA02517 (putative transposase OrfB; Reviewed), PRK09678 (DNA-binding transcriptional regulator; Provisional), RVT-Retrons, Arm-DNA-bind_3 (pfam13356), COG2085 (Predicted dinucleotide-binding enzyme )