myRT

myRT report for GCA_002192335.1_ASM219233v1

Download annotations/find similar RTs

Seq: CP021755.1 Klebsiella pneumoniae strain AR_0113 plasmid unitig_4, complete sequence (45740 bp)
Overview 1 RT 1: 16214-19667 bp Neighborhood of RT #1 [16214, 19705] PRK10276 RVT-GII Zn_Tnp_IS1 HTH_Tnp_IS1 Rep_3 Feature: gene Location: 16214-16645 bp Ori: ASA02283.1 Feature: domain Description: PRK10276 Location: 16265-16628 bp Feature: domain Description: PRK1 0276 Location: 1 6265-1 6628 bp Feature: gene Location: 16803-17054 bp Feature: gene Location: 17054-18538 bp Ori: ASA02285.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17456-18146 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 7456-1 81 46 bp Feature: gene Location: 18690-19387 bp Feature: domain Description: Zn_Tnp_IS1 Location: 18696-18798 bp Feature: domain Description: Zn_Tnp_IS1 Location: 1 8696-1 8798 bp Feature: domain Description: HTH_Tnp_IS1 Location: 18819-18951 bp Feature: domain Description: HTH_Tnp_IS1 Location: 1 881 9-1 8951 bp Feature: gene Location: 19397-19705 bp Feature: domain Description: Rep_3 Location: 19403-19667 bp Feature: domain Description: Rep_3 Location: 1 9403-1 9667 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, Zn_Tnp_IS1 (pfam03811), HTH_Tnp_IS1 (pfam12759), Rep_3 (pfam01051)

Seq: CP021751.1 Klebsiella pneumoniae strain AR_0113 chromosome, complete genome (5380979 bp)
Overview 1 RT 1: 1261830-1264509 bp 2 RT 2: 1703135-1707997 bp 3 RT 3: 2046261-2050369 bp 4 RT 4: 2223864-2228432 bp 5 RT 5: 3460543-3465418 bp Neighborhood of RT #1 [1261830, 1264610] RVT-GII PRK10276 PRK10276 Neighborhood of RT #2 [1703135, 1708023] int RVT-GII Phage_CI_repr Phage_CI_repr Phage_CI_C Neighborhood of RT #3 [2046261, 2050371] DinI RVT-GII PRK10276 umuC Neighborhood of RT #4 [2223864, 2228434] XerC RVT-GII PRK10276 umuC Neighborhood of RT #5 [3460543, 3465423] YccC PRK10016 RVT-GII dacD Feature: gene Location: 1261830-1262039 bp Feature: gene Location: 1262241-1262492 bp Feature: gene Location: 1262492-1263976 bp Ori: ARZ97778.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1262894-1263584 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12 62 894-12 63584 bp Feature: gene Location: 1264054-1264293 bp Feature: gene Location: 1264293-1264610 bp Ori: ARZ97780.1 Feature: domain Description: PRK10276 Location: 1264299-1264413 bp Feature: domain Description: PRK102 76 Location: 12 642 99-12 64413 bp Feature: domain Description: PRK10276 Location: 1264440-1264509 bp Feature: domain Description: PRK102 76 Location: 12 64440-12 64509 bp Feature: gene Location: 1703135-1704187 bp Ori: ARZ98173.1 Feature: domain Description: int Location: 1703138-1704137 bp Feature: domain Description: int Location: 1703138-1704137 bp Feature: gene Location: 1704355-1704606 bp Feature: gene Location: 1704606-1706090 bp Ori: ARZ98175.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1705008-1705698 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1705008-1705698 bp Feature: gene Location: 1706189-1707133 bp Feature: gene Location: 1707145-1708023 bp Ori: ARZ98177.1 Feature: domain Description: Phage_CI_repr Location: 1707172-1707355 bp Feature: domain Description: Phage_CI_repr Location: 1707172 -1707355 bp Feature: domain Description: Phage_CI_repr Location: 1707484-1707676 bp Feature: domain Description: Phage_CI_repr Location: 1707484-1707676 bp Feature: domain Description: Phage_CI_C Location: 1707703-1707997 bp Feature: domain Description: Phage_CI_C Location: 1707703-1707997 bp Feature: gene Location: 2046261-2046503 bp Ori: ARZ98492.1 Feature: domain Description: DinI Location: 2046312-2046492 bp Feature: domain Description: DinI Location: 2 046312 -2 046492 bp Feature: gene Location: 2046870-2047121 bp Feature: gene Location: 2047121-2048605 bp Ori: ARZ98494.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2047523-2048213 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 04752 3-2 0482 13 bp Feature: gene Location: 2048684-2049103 bp Ori: ARZ98495.1 Feature: domain Description: PRK10276 Location: 2048687-2049098 bp Feature: domain Description: PRK102 76 Location: 2 048687-2 049098 bp Feature: gene Location: 2049106-2050371 bp Ori: ARZ98496.1 Feature: domain Description: umuC Location: 2049109-2050369 bp Feature: domain Description: umuC Location: 2 049109-2 050369 bp Feature: gene Location: 2223864-2224286 bp Ori: ARZ98675.1 Feature: domain Description: XerC Location: 2223900-2224245 bp Feature: domain Description: XerC Location: 2 2 2 3900-2 2 2 42 45 bp Feature: gene Location: 2224933-2225184 bp Feature: gene Location: 2225184-2226668 bp Ori: ARZ98677.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2225586-2226276 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 2 2 5586-2 2 2 62 76 bp Feature: gene Location: 2226748-2227167 bp Ori: ASA01722.1 Feature: domain Description: PRK10276 Location: 2226751-2227162 bp Feature: domain Description: PRK102 76 Location: 2 2 2 6751-2 2 2 7162 bp Feature: gene Location: 2227169-2228434 bp Ori: ARZ98678.1 Feature: domain Description: umuC Location: 2227172-2228432 bp Feature: domain Description: umuC Location: 2 2 2 7172 -2 2 2 8432 bp Feature: gene Location: 3460543-3461601 bp Ori: ARZ99866.1 Feature: domain Description: YccC Location: 3460549-3461587 bp Feature: domain Description: YccC Location: 3460549-3461587 bp Feature: gene Location: 3461700-3462173 bp Ori: ARZ99867.1 Feature: domain Description: PRK10016 Location: 3461703-3462162 bp Feature: domain Description: PRK10016 Location: 3461703-3462 162 bp Feature: gene Location: 3462255-3463739 bp Ori: ARZ99868.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3462657-3463347 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3462 657-3463347 bp Feature: gene Location: 3463739-3463990 bp Feature: gene Location: 3464260-3465423 bp Ori: ASA01774.1 Feature: domain Description: dacD Location: 3464263-3465418 bp Feature: domain Description: dacD Location: 34642 63-3465418 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), int (PHA02601), Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), DinI (pfam06183), umuC (PRK03609), XerC (COG4973), YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC)
dacD (PRK11397)

Seq: CP021752.1 Klebsiella pneumoniae strain AR_0113 plasmid unitig_1, complete sequence (209550 bp)
Overview 1 RT 1: 77673-81384 bp Neighborhood of RT #1 [77673, 81398] Antirestrict RVT-GII PRK10276 Feature: gene Location: 77673-78098 bp Ori: ASA01910.1 Feature: domain Description: Antirestrict Location: 77808-78096 bp Feature: domain Description: Antirestrict Location: 77808-78096 bp Feature: gene Location: 78619-78849 bp Feature: gene Location: 79083-80567 bp Ori: ASA01911.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 79485-80175 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 79485-80175 bp Feature: gene Location: 80567-80818 bp Feature: gene Location: 80973-81398 bp Ori: ASA01913.1 Feature: domain Description: PRK10276 Location: 80976-81384 bp Feature: domain Description: PRK10276 Location: 80976-813 84 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Antirestrict (pfam03230), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)