myRT

myRT report for GCA_002193095.1_ASM219309v1

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Seq: CP021454.1 Escherichia coli strain H105, complete genome (4978342 bp)
Overview 1 RT 1: 2788669-2793567 bp Neighborhood of RT #1 [2788669, 2793567] RVT-Retrons Feature: gene Location: 2788669-2789184 bp Feature: gene Location: 2789181-2790308 bp Feature: gene Location: 2790555-2792312 bp Ori: ASA43176.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2790699-2791317 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2790699-2791 31 7 bp Feature: gene Location: 2792883-2793122 bp Feature: gene Location: 2793337-2793567 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons

Seq: CP021871.1 Escherichia coli strain H105 plasmid pH105, complete sequence (134899 bp)
Overview 1 RT 1: 2263-5357 bp 2 RT 2: 17158-18596 bp Neighborhood of RT #1 [2263, 5357] InsE PHA02517 RVT-GII GIIM Neighborhood of RT #2 [17158, 18685] RVT-GII IS5 PRK10173 Feature: gene Location: 2263-2667 bp Ori: ASA45401.1 Feature: domain Description: InsE Location: 2293-2629 bp Feature: domain Description: InsE Location: 2 2 93-2 62 9 bp Feature: gene Location: 2744-3085 bp Feature: domain Description: PHA02517 Location: 2747-3083 bp Feature: domain Description: PHA02 517 Location: 2 747-3083 bp Feature: gene Location: 3169-4692 bp Ori: ASA45402.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3442-4174 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3442 -4174 bp Feature: domain Description: GIIM Note: maturase Location: 4249-4447 bp Feature: domain Description: GIIM Note: maturase Location: 42 49-4447 bp Feature: gene Location: 4763-5071 bp Feature: gene Location: 4986-5357 bp Feature: gene Location: 17158-17529 bp Feature: gene Location: 17444-17752 bp Feature: gene Location: 17823-18152 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18096-18153 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18096-18153 bp Feature: gene Location: 18153-18326 bp Feature: domain Description: IS5 Location: 18162-18312 bp Feature: domain Description: IS5 Location: 18162 -18312 bp Feature: gene Location: 18365-18685 bp Ori: ASA45420.1 Feature: domain Description: PRK10173 Location: 18368-18596 bp Feature: domain Description: PRK10173 Location: 18368-18596 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), IS5 (COG3039), PRK10173 (glucose-1-phosphatase/inositol phosphatase; Provisional)