myRT

myRT report for GCA_002196495.1_ASM219649v1

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Seq: CP021846.1 Escherichia coli strain EC1515 plasmid pEC1515-2, complete sequence (92350 bp)
Overview 1 RT 1: 29507-32749 bp 2 RT 2: 63266-66495 bp Neighborhood of RT #1 [29507, 32749] TraH PHA02517 RVT-GII GIIM Neighborhood of RT #2 [63266, 66495] PRK11114 RVT-GII RVT-GII GIIM InsE Feature: gene Location: 29507-29956 bp Ori: ASA68597.1 Feature: domain Description: TraH Location: 29606-29924 bp Feature: domain Description: TraH Location: 29606-29924 bp Feature: gene Location: 29953-30420 bp Feature: domain Description: PHA02517 Location: 29956-30415 bp Feature: domain Description: PHA0251 7 Location: 29956-3041 5 bp Feature: gene Location: 30501-32024 bp Ori: ASA68598.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 30774-31506 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 30774-31 506 bp Feature: domain Description: GIIM Note: maturase Location: 31581-31779 bp Feature: domain Description: GIIM Note: maturase Location: 31 581 -31 779 bp Feature: gene Location: 32095-32403 bp Feature: gene Location: 32318-32749 bp Feature: gene Location: 63266-63721 bp Feature: domain Description: PRK11114 Location: 63308-63704 bp Feature: domain Description: PRK1 1 1 1 4 Location: 63308-63704 bp Feature: gene Location: 64061-64240 bp Feature: gene Location: 64465-65109 bp Ori: ASA68626.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 64753-65104 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 64753-651 04 bp Feature: gene Location: 65116-65811 bp Ori: ASA68627.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 65119-65371 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 651 1 9-65371 bp Feature: domain Description: GIIM Note: maturase Location: 65419-65650 bp Feature: domain Description: GIIM Note: maturase Location: 6541 9-65650 bp Feature: gene Location: 65886-66070 bp Feature: gene Location: 66171-66495 bp Ori: ASA68628.1 Feature: domain Description: InsE Location: 66174-66495 bp Feature: domain Description: InsE Location: 661 74-66495 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TraH (pfam06122), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), PRK11114 (cellulose biosynthesis cyclic di-GMP-binding regulatory protein BcsB), InsE (COG2963)

Seq: CP021844.1 Escherichia coli strain EC1515 chromosome, complete genome (5167363 bp)
Overview 1 RT 1: 2051008-2055008 bp 2 RT 2: 2638904-2642684 bp Neighborhood of RT #1 [2051008, 2055016] DcuC RVT-GII Asparaginase_2 Neighborhood of RT #2 [2638904, 2642686] PRK01271 YhhI YhhI YhhI RVT-GII GIIM Rhs_assc_core Feature: gene Location: 2051008-2052369 bp Ori: ASA65456.1 Feature: domain Description: DcuC Location: 2051011-2052343 bp Feature: domain Description: DcuC Location: 2 051011-2 052 343 bp Feature: gene Location: 2052584-2052790 bp Feature: gene Location: 2053015-2053577 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2053321-2053423 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 05332 1-2 05342 3 bp Feature: gene Location: 2053625-2053827 bp Feature: gene Location: 2054012-2055016 bp Ori: ASA68289.1 Feature: domain Description: Asparaginase_2 Location: 2054075-2055008 bp Feature: domain Description: Asparaginase_2 Location: 2 054075-2 055008 bp Feature: gene Location: 2638904-2639131 bp Ori: ASA65991.1 Feature: domain Description: PRK01271 Location: 2638907-2639129 bp Feature: domain Description: PRK012 71 Location: 2 638907-2 63912 9 bp Feature: gene Location: 2639442-2640560 bp Ori: ASA65992.1 Feature: domain Description: YhhI Location: 2639445-2639790 bp Feature: domain Description: YhhI Location: 2 639445-2 639790 bp Feature: domain Description: YhhI Location: 2639847-2640201 bp Feature: domain Description: YhhI Location: 2 639847-2 6402 01 bp Feature: domain Description: YhhI Location: 2640222-2640462 bp Feature: domain Description: YhhI Location: 2 6402 2 2 -2 640462 bp Feature: gene Location: 2640784-2642084 bp Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2641060-2641717 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 641060-2 641717 bp Feature: domain Description: GIIM Note: maturase Location: 2641801-2641921 bp Feature: domain Description: GIIM Note: maturase Location: 2 641801-2 64192 1 bp Feature: gene Location: 2642526-2642585 bp Feature: gene Location: 2642591-2642686 bp Feature: domain Description: Rhs_assc_core Location: 2642603-2642684 bp Feature: domain Description: Rhs_assc_core Location: 2 642 603-2 642 684 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DcuC (TIGR00771), RVT-GII, Asparaginase_2 (pfam01112), PRK01271 (tautomerase PptA), YhhI (COG5433), GIIM (pfam08388), Rhs_assc_core (TIGR03696)