myRT

myRT report for GCA_002197205.1_ASM219720v1

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Seq: CP021862.1 Streptococcus agalactiae strain CUGBS591 chromosome, complete genome (2227680 bp)
Overview 1 RT 1: 661507-671676 bp 2 RT 2: 1923788-1927037 bp Neighborhood of RT #1 [661507, 671676] N6_Mtase COG4646 RVT-GII Intron_maturas2 HNHc KOG1000 Neighborhood of RT #2 [1923788, 1927037] HTH_XRE RVT-GII GIIM PRK07275 PRK07275 Feature: gene Location: 661507-662058 bp Feature: gene Location: 662108-667549 bp Ori: ASA79319.1 Feature: domain Description: N6_Mtase Location: 664100-664691 bp Feature: domain Description: N6_Mtase Location: 6641 00-664691 bp Feature: domain Description: COG4646 Location: 665282-667406 bp Feature: domain Description: COG4646 Location: 665282-667406 bp Feature: gene Location: 668047-669825 bp Ori: ASA80792.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 668308-669100 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 668308-6691 00 bp Feature: domain Description: Intron_maturas2 Location: 669205-669436 bp Feature: domain Description: Intron_maturas2 Location: 669205-669436 bp Feature: domain Description: HNHc Note: nucleases Location: 669601-669787 bp Feature: domain Description: HNHc Note: nucleases Location: 669601 -669787 bp Feature: gene Location: 669963-671306 bp Ori: ASA79320.1 Feature: domain Description: KOG1000 Location: 670242-670557 bp Feature: domain Description: KOG1 000 Location: 670242-670557 bp Feature: gene Location: 671377-671676 bp Feature: gene Location: 1923788-1924147 bp Ori: ASA80477.1 Feature: domain Description: HTH_XRE Location: 1923812-1923974 bp Feature: domain Description: HTH_XRE Location: 1 92381 2-1 923974 bp Feature: gene Location: 1924132-1924392 bp Feature: gene Location: 1924525-1925844 bp Ori: ASA80479.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1924825-1925458 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 924825-1 925458 bp Feature: domain Description: GIIM Note: maturase Location: 1925527-1925749 bp Feature: domain Description: GIIM Note: maturase Location: 1 925527-1 925749 bp Feature: gene Location: 1926425-1926841 bp Ori: ASA80480.1 Feature: domain Description: PRK07275 Location: 1926428-1926764 bp Feature: domain Description: PRK07275 Location: 1 926428-1 926764 bp Feature: domain Description: PRK07275 Location: 1926791-1926839 bp Feature: domain Description: PRK07275 Location: 1 926791 -1 926839 bp Feature: gene Location: 1926831-1927037 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT N6_Mtase (pfam02384), COG4646 (Adenine-specific DNA methylase, N12 class ), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), KOG1000 (KOG1000, Chromatin remodeling protein HARP/SMARCAL1, DEAD-box superfamily ), HTH_XRE (smart00530), GIIM (pfam08388), PRK07275 (single-stranded DNA-binding protein; Provisional)