myRT

myRT report for GCA_002197445.1_ASM219744v1

Download annotations/find similar RTs

Seq: CP021802.1 Sinorhizobium meliloti strain USDA1021 plasmid psymB, complete sequence (2011522 bp)
Overview 1 RT 1: 582236-587983 bp 2 RT 2: 951369-954309 bp 3 RT 3: 1472336-1478490 bp Neighborhood of RT #1 [582236, 587988] PRK12687 PRK12687 RVT-GII GIIM PRK12687 PRK12687 PRK12687 Neighborhood of RT #2 [951369, 954309] RVT-GII MazF Neighborhood of RT #3 [1472336, 1478501] HTH_ARSR AraJ RVT-GII GIIM PRK09356 hutH Feature: gene Location: 582236-583423 bp Ori: ASP68196.1 Feature: domain Description: PRK12687 Location: 582239-582836 bp Feature: domain Description: PRK1 2687 Location: 582239-582836 bp Feature: domain Description: PRK12687 Location: 583091-583421 bp Feature: domain Description: PRK1 2687 Location: 583091 -583421 bp Feature: gene Location: 583518-583847 bp Feature: gene Location: 583901-585262 bp Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 584228-584843 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 584228-584843 bp Feature: domain Description: GIIM Note: maturase Location: 584897-585113 bp Feature: domain Description: GIIM Note: maturase Location: 584897-5851 1 3 bp Feature: gene Location: 585521-586708 bp Ori: ASP68197.1 Feature: domain Description: PRK12687 Location: 585524-586130 bp Feature: domain Description: PRK1 2687 Location: 585524-5861 30 bp Feature: domain Description: PRK12687 Location: 586379-586703 bp Feature: domain Description: PRK1 2687 Location: 586379-586703 bp Feature: gene Location: 587023-587988 bp Ori: ASP68198.1 Feature: domain Description: PRK12687 Location: 587026-587983 bp Feature: domain Description: PRK1 2687 Location: 587026-587983 bp Feature: gene Location: 951369-951671 bp Feature: gene Location: 952068-952397 bp Feature: gene Location: 952451-953807 bp Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 952778-953285 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 952778-953285 bp Feature: gene Location: 953760-954107 bp Ori: ASP68530.1 Feature: domain Description: MazF Location: 953763-954096 bp Feature: domain Description: MazF Location: 953763-954096 bp Feature: gene Location: 954107-954309 bp Feature: gene Location: 1472336-1472707 bp Ori: ASP68977.1 Feature: domain Description: HTH_ARSR Location: 1472393-1472591 bp Feature: domain Description: HTH_ARSR Location: 1 472393-1 472591 bp Feature: gene Location: 1472797-1473981 bp Ori: ASP68978.1 Feature: domain Description: AraJ Location: 1472800-1473958 bp Feature: domain Description: AraJ Location: 1 472800-1 473958 bp Feature: gene Location: 1474158-1475519 bp Ori: ASP68979.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1474485-1475100 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 474485-1 4751 00 bp Feature: domain Description: GIIM Note: maturase Location: 1475154-1475370 bp Feature: domain Description: GIIM Note: maturase Location: 1 4751 54-1 475370 bp Feature: gene Location: 1475722-1476969 bp Ori: ASP68980.1 Feature: domain Description: PRK09356 Location: 1475758-1476961 bp Feature: domain Description: PRK09356 Location: 1 475758-1 476961 bp Feature: gene Location: 1476966-1478501 bp Ori: ASP68981.1 Gene: hutH Feature: domain Description: hutH Location: 1476975-1478490 bp Feature: domain Description: hutH Location: 1 476975-1 478490 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK12687 (flagellin; Reviewed), RVT-GII, GIIM (pfam08388), MazF (COG2337), HTH_ARSR (smart00418), AraJ (COG2814), PRK09356 (imidazolonepropionase; Validated), hutH (TIGR01225)

Seq: CP021803.1 Sinorhizobium meliloti strain USDA1021 plasmid accessoryA, complete sequence (297816 bp)
Overview 1 RT 1: 221551-227514 bp Neighborhood of RT #1 [221551, 227519] ZapB DDE_Tnp_IS66 DDE_Tnp_IS66 RVT-GII Transposase_mut PSK_trans_fac Feature: gene Location: 221551-221871 bp Feature: gene Location: 221873-223540 bp Ori: ASP69682.1 Feature: domain Description: ZapB Location: 221942-222092 bp Feature: domain Description: ZapB Location: 2 2 1942 -2 2 2 092 bp Feature: domain Description: DDE_Tnp_IS66 Location: 222407-222632 bp Feature: domain Description: DDE_Tnp_IS66 Location: 2 2 2 407-2 2 2 632 bp Feature: domain Description: DDE_Tnp_IS66 Location: 222980-223391 bp Feature: domain Description: DDE_Tnp_IS66 Location: 2 2 2 980-2 2 3391 bp Feature: gene Location: 223681-225090 bp Ori: ASP69683.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 224035-224722 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 2 4035-2 2 472 2 bp Feature: gene Location: 225549-226750 bp Feature: domain Description: Transposase_mut Location: 225558-225783 bp Feature: domain Description: Transposase_mut Location: 2 2 5558-2 2 5783 bp Feature: gene Location: 227178-227519 bp Ori: ASP69684.1 Feature: domain Description: PSK_trans_fac Location: 227280-227514 bp Feature: domain Description: PSK_trans_fac Location: 2 2 72 80-2 2 7514 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ZapB (pfam06005), DDE_Tnp_IS66 (pfam03050), RVT-GII, Transposase_mut (pfam00872), PSK_trans_fac (pfam07704)