myRT

myRT report for GCA_002197505.1_ASM219750v1

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Seq: CP021859.1 Klebsiella pneumoniae strain AR_0125 chromosome, complete genome (5322544 bp)
Overview 1 RT 1: 1245050-1249931 bp 2 RT 2: 4867170-4872032 bp 3 RT 3: 5210296-5214404 bp Neighborhood of RT #1 [1245050, 1249936] YccC PRK10016 RVT-GII dacD Neighborhood of RT #2 [4867170, 4872058] int RVT-GII Phage_CI_repr Phage_CI_repr Phage_CI_C Neighborhood of RT #3 [5210296, 5214406] DinI RVT-GII PRK10276 umuC Feature: gene Location: 1245050-1246108 bp Ori: ASB11540.1 Feature: domain Description: YccC Location: 1245056-1246094 bp Feature: domain Description: YccC Location: 1 245056-1 246094 bp Feature: gene Location: 1246207-1246680 bp Ori: ASB11541.1 Feature: domain Description: PRK10016 Location: 1246210-1246669 bp Feature: domain Description: PRK1 001 6 Location: 1 24621 0-1 246669 bp Feature: gene Location: 1246762-1248246 bp Ori: ASB11542.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1247164-1247854 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 2471 64-1 247854 bp Feature: gene Location: 1248246-1248497 bp Feature: gene Location: 1248767-1249936 bp Ori: ASB11544.1 Feature: domain Description: dacD Location: 1248776-1249931 bp Feature: domain Description: dacD Location: 1 248776-1 249931 bp Feature: gene Location: 4867170-4868222 bp Ori: ASB14837.1 Feature: domain Description: int Location: 4867173-4868172 bp Feature: domain Description: int Location: 48671 73-48681 72 bp Feature: gene Location: 4868390-4868641 bp Feature: gene Location: 4868641-4870125 bp Ori: ASB14839.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4869043-4869733 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4869043-4869733 bp Feature: gene Location: 4870224-4871168 bp Feature: gene Location: 4871180-4872058 bp Ori: ASB14841.1 Feature: domain Description: Phage_CI_repr Location: 4871207-4871390 bp Feature: domain Description: Phage_CI_repr Location: 4871 207-4871 390 bp Feature: domain Description: Phage_CI_repr Location: 4871519-4871711 bp Feature: domain Description: Phage_CI_repr Location: 4871 51 9-4871 71 1 bp Feature: domain Description: Phage_CI_C Location: 4871738-4872032 bp Feature: domain Description: Phage_CI_C Location: 4871 738-4872032 bp Feature: gene Location: 5210296-5210538 bp Ori: ASB15154.1 Feature: domain Description: DinI Location: 5210347-5210527 bp Feature: domain Description: DinI Location: 521 0347-521 0527 bp Feature: gene Location: 5210905-5211156 bp Feature: gene Location: 5211156-5212640 bp Ori: ASB15156.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5211558-5212248 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 521 1 558-521 2248 bp Feature: gene Location: 5212719-5213138 bp Ori: ASB15157.1 Feature: domain Description: PRK10276 Location: 5212722-5213133 bp Feature: domain Description: PRK1 0276 Location: 521 2722-521 31 33 bp Feature: gene Location: 5213141-5214406 bp Ori: ASB15158.1 Feature: domain Description: umuC Location: 5213144-5214404 bp Feature: domain Description: umuC Location: 521 31 44-521 4404 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), RVT-GII, dacD (PRK11397), int (PHA02601), Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), DinI (pfam06183), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609)

Seq: CP021858.1 Klebsiella pneumoniae strain AR_0125 plasmid tig00000005_pilon, complete sequence (47277 bp)
Overview 1 RT 1: 5450-8924 bp Neighborhood of RT #1 [5450, 8941] Rep_3 Zn_Tnp_IS1 HTH_Tnp_IS1 RVT-GII PRK10276 Feature: gene Location: 5450-5758 bp Feature: domain Description: Rep_3 Location: 5456-5720 bp Feature: domain Description: Rep_3 Location: 5456-572 0 bp Feature: gene Location: 5768-6465 bp Feature: domain Description: Zn_Tnp_IS1 Location: 5774-5876 bp Feature: domain Description: Zn_Tnp_IS1 Location: 5774-5876 bp Feature: domain Description: HTH_Tnp_IS1 Location: 5897-6029 bp Feature: domain Description: HTH_Tnp_IS1 Location: 5897-602 9 bp Feature: gene Location: 6617-8101 bp Ori: ASB10300.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7019-7709 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7019-7709 bp Feature: gene Location: 8101-8352 bp Feature: gene Location: 8510-8941 bp Ori: ASB10302.1 Feature: domain Description: PRK10276 Location: 8561-8924 bp Feature: domain Description: PRK102 76 Location: 8561-892 4 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Rep_3 (pfam01051), Zn_Tnp_IS1 (pfam03811), HTH_Tnp_IS1 (pfam12759), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)