myRT

myRT report for GCA_002202215.1_ASM220221v1

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Seq: CP021943.1 Klebsiella pneumoniae strain AR_0145 plasmid tig00000219, complete sequence (38384 bp)
Overview 1 RT 1: 34992-38466 bp Neighborhood of RT #1 [34992, 38483] Rep_3 Zn_Tnp_IS1 HTH_Tnp_IS1 RVT-GII PRK10276 Feature: gene Location: 34992-35300 bp Feature: domain Description: Rep_3 Location: 34998-35262 bp Feature: domain Description: Rep_3 Location: 34998-35262 bp Feature: gene Location: 35310-36007 bp Feature: domain Description: Zn_Tnp_IS1 Location: 35316-35418 bp Feature: domain Description: Zn_Tnp_IS1 Location: 3531 6-3541 8 bp Feature: domain Description: HTH_Tnp_IS1 Location: 35439-35571 bp Feature: domain Description: HTH_Tnp_IS1 Location: 35439-35571 bp Feature: gene Location: 36159-37643 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 36561-37251 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 36561 -37251 bp Feature: gene Location: 37643-37894 bp Feature: gene Location: 38052-38483 bp Ori: ASC42939.1 Feature: domain Description: PRK10276 Location: 38103-38466 bp Feature: domain Description: PRK1 0276 Location: 381 03-38466 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Rep_3 (pfam01051), Zn_Tnp_IS1 (pfam03811), HTH_Tnp_IS1 (pfam12759), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)

Seq: CP021939.1 Klebsiella pneumoniae strain AR_0145 chromosome, complete genome (5374215 bp)
Overview 1 RT 1: 71147-74205 bp 2 RT 2: 2854124-2858232 bp 3 RT 3: 3024003-3032189 bp 4 RT 4: 4279886-4286263 bp Neighborhood of RT #1 [71147, 74207] RVT-Retrons HTH_XRE DinI Neighborhood of RT #2 [2854124, 2858234] DinI RVT-GII PRK10276 umuC Neighborhood of RT #3 [3024003, 3032191] XerC RVT-GII PRK10276 umuC RVT-UG11 PRK09951 PRK15110 Neighborhood of RT #4 [4279886, 4286263] AAA_15 RVT-Retrons Nuc_deoxyrib_tr Feature: gene Location: 71147-71341 bp Feature: gene Location: 71340-71771 bp Feature: gene Location: 71910-72860 bp Ori: ASC37644.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 72090-72633 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 72 090-72 633 bp Feature: gene Location: 72838-73146 bp Ori: ASC37645.1 Feature: domain Description: HTH_XRE Location: 72850-73015 bp Feature: domain Description: HTH_XRE Location: 72 850-73015 bp Feature: gene Location: 73767-74207 bp Ori: ASC37646.1 Feature: domain Description: DinI Location: 74022-74205 bp Feature: domain Description: DinI Location: 7402 2 -742 05 bp Feature: gene Location: 2854124-2854366 bp Ori: ASC40134.1 Feature: domain Description: DinI Location: 2854175-2854355 bp Feature: domain Description: DinI Location: 2 854175-2 854355 bp Feature: gene Location: 2854733-2854984 bp Feature: gene Location: 2854984-2856468 bp Ori: ASC40136.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2855386-2856076 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 855386-2 856076 bp Feature: gene Location: 2856547-2856966 bp Ori: ASC40137.1 Feature: domain Description: PRK10276 Location: 2856550-2856961 bp Feature: domain Description: PRK102 76 Location: 2 856550-2 856961 bp Feature: gene Location: 2856969-2858234 bp Ori: ASC40138.1 Feature: domain Description: umuC Location: 2856972-2858232 bp Feature: domain Description: umuC Location: 2 856972 -2 8582 32 bp Feature: gene Location: 3024003-3024425 bp Ori: ASC40310.1 Feature: domain Description: XerC Location: 3024081-3024384 bp Feature: domain Description: XerC Location: 302 4081-302 4384 bp Feature: gene Location: 3025070-3025321 bp Feature: gene Location: 3025321-3026805 bp Ori: ASC40312.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3025723-3026413 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 302 572 3-302 6413 bp Feature: gene Location: 3026885-3027304 bp Ori: ASC40313.1 Feature: domain Description: PRK10276 Location: 3026888-3027299 bp Feature: domain Description: PRK102 76 Location: 302 6888-302 72 99 bp Feature: gene Location: 3027306-3028571 bp Ori: ASC40314.1 Feature: domain Description: umuC Location: 3027309-3028569 bp Feature: domain Description: umuC Location: 302 7309-302 8569 bp Feature: gene Location: 3029523-3030152 bp Ori: ASC42588.1 Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 3029526-3029973 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 302 952 6-302 9973 bp Feature: gene Location: 3030353-3031021 bp Ori: ASC40315.1 Feature: domain Description: PRK09951 Location: 3030356-3031019 bp Feature: domain Description: PRK09951 Location: 3030356-3031019 bp Feature: gene Location: 3031226-3032191 bp Ori: ASC40316.1 Feature: domain Description: PRK15110 Location: 3031229-3032189 bp Feature: domain Description: PRK15110 Location: 30312 2 9-3032 189 bp Feature: gene Location: 4279886-4280116 bp Feature: gene Location: 4281029-4283275 bp Ori: ASC41495.1 Feature: domain Description: AAA_15 Location: 4281032-4282040 bp Feature: domain Description: AAA_15 Location: 42 81032 -42 82 040 bp Feature: gene Location: 4283390-4284490 bp Ori: ASC41496.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4283570-4284104 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 42 83570-42 84104 bp Feature: gene Location: 4285146-4286015 bp Ori: ASC41497.1 Feature: domain Description: Nuc_deoxyrib_tr Location: 4285668-4285839 bp Feature: domain Description: Nuc_deoxyrib_tr Location: 42 85668-42 85839 bp Feature: gene Location: 4286012-4286263 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, HTH_XRE (smart00530), DinI (pfam06183), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609), XerC (COG4973), RVT-UG11, PRK09951 (hypothetical protein; Provisional), PRK15110 (peptide ABC transporter permease SapB)
AAA_15 (pfam13175), Nuc_deoxyrib_tr (pfam05014)