myRT

myRT report for GCA_002202235.1_ASM220223v1

Download annotations/find similar RTs

Seq: CP021948.1 Klebsiella pneumoniae strain AR_0152 plasmid tig00000214, complete sequence (38384 bp)
Overview 1 RT 1: 24802-28276 bp Neighborhood of RT #1 [24802, 28293] Rep_3 Zn_Tnp_IS1 HTH_Tnp_IS1 RVT-GII PRK10276 Feature: gene Location: 24802-25110 bp Feature: domain Description: Rep_3 Location: 24808-25072 bp Feature: domain Description: Rep_3 Location: 24808-25072 bp Feature: gene Location: 25120-25817 bp Feature: domain Description: Zn_Tnp_IS1 Location: 25126-25228 bp Feature: domain Description: Zn_Tnp_IS1 Location: 251 26-25228 bp Feature: domain Description: HTH_Tnp_IS1 Location: 25249-25381 bp Feature: domain Description: HTH_Tnp_IS1 Location: 25249-25381 bp Feature: gene Location: 25969-27453 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 26371-27061 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 26371 -27061 bp Feature: gene Location: 27453-27704 bp Feature: gene Location: 27862-28293 bp Ori: ASC31849.1 Feature: domain Description: PRK10276 Location: 27913-28276 bp Feature: domain Description: PRK1 0276 Location: 2791 3-28276 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Rep_3 (pfam01051), Zn_Tnp_IS1 (pfam03811), HTH_Tnp_IS1 (pfam12759), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)

Seq: CP021944.1 Klebsiella pneumoniae strain AR_0152 chromosome, complete genome (5374770 bp)
Overview 1 RT 1: 433990-440367 bp 2 RT 2: 1599465-1602523 bp 3 RT 3: 4382440-4386548 bp 4 RT 4: 4552877-4561063 bp Neighborhood of RT #1 [433990, 440367] AAA_15 RVT-Retrons Nuc_deoxyrib_tr Neighborhood of RT #2 [1599465, 1602525] RVT-Retrons HTH_XRE DinI Neighborhood of RT #3 [4382440, 4386550] DinI RVT-GII PRK10276 umuC Neighborhood of RT #4 [4552877, 4561065] XerC RVT-GII PRK10276 umuC RVT-UG11 PRK09951 PRK15110 Feature: gene Location: 433990-434220 bp Feature: gene Location: 435133-437379 bp Ori: ASC26788.1 Feature: domain Description: AAA_15 Location: 435136-436144 bp Feature: domain Description: AAA_15 Location: 435136-436144 bp Feature: gene Location: 437494-438594 bp Ori: ASC26789.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 437674-438208 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 437674-4382 08 bp Feature: gene Location: 439250-440119 bp Ori: ASC26790.1 Feature: domain Description: Nuc_deoxyrib_tr Location: 439772-439943 bp Feature: domain Description: Nuc_deoxyrib_tr Location: 439772 -439943 bp Feature: gene Location: 440116-440367 bp Feature: gene Location: 1599465-1599659 bp Feature: gene Location: 1599658-1600089 bp Feature: gene Location: 1600228-1601178 bp Ori: ASC27830.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1600408-1600951 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1600408-1600951 bp Feature: gene Location: 1601156-1601464 bp Ori: ASC27831.1 Feature: domain Description: HTH_XRE Location: 1601168-1601333 bp Feature: domain Description: HTH_XRE Location: 1601168-1601333 bp Feature: gene Location: 1602085-1602525 bp Ori: ASC27832.1 Feature: domain Description: DinI Location: 1602340-1602523 bp Feature: domain Description: DinI Location: 1602 340-1602 52 3 bp Feature: gene Location: 4382440-4382682 bp Ori: ASC30322.1 Feature: domain Description: DinI Location: 4382491-4382671 bp Feature: domain Description: DinI Location: 4382 491-4382 671 bp Feature: gene Location: 4383049-4383300 bp Feature: gene Location: 4383300-4384784 bp Ori: ASC30324.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4383702-4384392 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4383702 -4384392 bp Feature: gene Location: 4384863-4385282 bp Ori: ASC30325.1 Feature: domain Description: PRK10276 Location: 4384866-4385277 bp Feature: domain Description: PRK102 76 Location: 4384866-43852 77 bp Feature: gene Location: 4385285-4386550 bp Ori: ASC30326.1 Feature: domain Description: umuC Location: 4385288-4386548 bp Feature: domain Description: umuC Location: 43852 88-4386548 bp Feature: gene Location: 4552877-4553299 bp Ori: ASC30498.1 Feature: domain Description: XerC Location: 4552955-4553258 bp Feature: domain Description: XerC Location: 4552 955-45532 58 bp Feature: gene Location: 4553944-4554195 bp Feature: gene Location: 4554195-4555679 bp Ori: ASC30500.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4554597-4555287 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4554597-45552 87 bp Feature: gene Location: 4555759-4556178 bp Ori: ASC30501.1 Feature: domain Description: PRK10276 Location: 4555762-4556173 bp Feature: domain Description: PRK102 76 Location: 4555762 -4556173 bp Feature: gene Location: 4556180-4557445 bp Ori: ASC30502.1 Feature: domain Description: umuC Location: 4556183-4557443 bp Feature: domain Description: umuC Location: 4556183-4557443 bp Feature: gene Location: 4558397-4559026 bp Ori: ASC31463.1 Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 4558400-4558847 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 4558400-4558847 bp Feature: gene Location: 4559227-4559895 bp Ori: ASC30503.1 Feature: domain Description: PRK09951 Location: 4559230-4559893 bp Feature: domain Description: PRK09951 Location: 45592 30-4559893 bp Feature: gene Location: 4560100-4561065 bp Ori: ASC30504.1 Feature: domain Description: PRK15110 Location: 4560103-4561063 bp Feature: domain Description: PRK15110 Location: 4560103-4561063 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AAA_15 (pfam13175), RVT-Retrons, Nuc_deoxyrib_tr (pfam05014), HTH_XRE (smart00530), DinI (pfam06183), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609), XerC (COG4973), RVT-UG11
PRK09951 (hypothetical protein; Provisional), PRK15110 (peptide ABC transporter permease SapB)

Seq: CP021946.1 Klebsiella pneumoniae strain AR_0152 plasmid tig00000195, complete sequence (120345 bp)
Overview 1 RT 1: 116221-120304 bp Neighborhood of RT #1 [116221, 120441] PRK10276 RVT-GII StbA Plasmid_stab_B Plasmid_stab_B Feature: gene Location: 116221-116652 bp Ori: ASC31751.1 Feature: domain Description: PRK10276 Location: 116272-116635 bp Feature: domain Description: PRK10276 Location: 116272-11663 5 bp Feature: gene Location: 116811-117062 bp Feature: gene Location: 117062-118546 bp Ori: ASC31753.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 117464-118154 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 117464-118154 bp Feature: gene Location: 118796-119767 bp Ori: ASC31754.1 Feature: domain Description: StbA Location: 118799-119744 bp Feature: domain Description: StbA Location: 118799-119744 bp Feature: gene Location: 119770-120441 bp Ori: ASC31618.1 Feature: domain Description: Plasmid_stab_B Location: 119785-119992 bp Feature: domain Description: Plasmid_stab_B Location: 119785-119992 bp Feature: domain Description: Plasmid_stab_B Location: 120097-120304 bp Feature: domain Description: Plasmid_stab_B Location: 120097-1203 04 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, StbA (pfam06406), Plasmid_stab_B (pfam10784)