myRT

myRT report for GCA_002211725.1_ASM221172v1

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Seq: CP022155.1 Escherichia coli strain ABWA45 plasmid pABWA45_1, complete sequence (145220 bp)
Overview 1 RT 1: 5206-8271 bp Neighborhood of RT #1 [5206, 8271] PRK10276 RVT-GII InsA Feature: gene Location: 5206-5535 bp Feature: domain Description: PRK10276 Location: 5209-5530 bp Feature: domain Description: PRK1 0276 Location: 5209-5530 bp Feature: gene Location: 5688-5939 bp Feature: gene Location: 5939-7423 bp Ori: ASG52399.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6341-7031 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6341 -7031 bp Feature: gene Location: 7574-7823 bp Ori: ASG52400.1 Feature: domain Description: InsA Location: 7580-7823 bp Feature: domain Description: InsA Location: 7580-7823 bp Feature: gene Location: 7823-8271 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, InsA (COG3677)

Seq: CP022154.1 Escherichia coli strain ABWA45 chromosome, complete genome (5094639 bp)
Overview 1 RT 1: 206591-210162 bp 2 RT 2: 881700-885696 bp 3 RT 3: 3287532-3290340 bp 4 RT 4: 4159680-4164205 bp 5 RT 5: 4261972-4264846 bp Neighborhood of RT #1 [206591, 210167] RVT-GII GIIM PRK11114 PRK11097 Neighborhood of RT #2 [881700, 885696] RVT-GII GIIM PHA02517 Neighborhood of RT #3 [3287532, 3290340] PHA02517 RVT-GII GIIM Neighborhood of RT #4 [4159680, 4165044] YeeP RVT-GII HTH_17 PLDc_N_DEXD_c DEXDc_RapA SF2_C_SNF Neighborhood of RT #5 [4261972, 4264846] PHA02517 RVT-GII GIIM Feature: gene Location: 206591-206986 bp Feature: gene Location: 206901-207209 bp Feature: gene Location: 207280-208803 bp Ori: ASG47683.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 207553-208285 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 07553-2 082 85 bp Feature: domain Description: GIIM Note: maturase Location: 208360-208558 bp Feature: domain Description: GIIM Note: maturase Location: 2 08360-2 08558 bp Feature: gene Location: 208893-209054 bp Feature: domain Description: PRK11114 Location: 208899-209043 bp Feature: domain Description: PRK11114 Location: 2 08899-2 09043 bp Feature: gene Location: 209061-210167 bp Ori: ASG47684.1 Feature: domain Description: PRK11097 Location: 209067-210162 bp Feature: domain Description: PRK11097 Location: 2 09067-2 10162 bp Feature: gene Location: 881700-882110 bp Feature: gene Location: 882025-882333 bp Feature: gene Location: 882404-883927 bp Ori: ASG48328.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 882677-883409 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 882 677-883409 bp Feature: domain Description: GIIM Note: maturase Location: 883484-883682 bp Feature: domain Description: GIIM Note: maturase Location: 883484-883682 bp Feature: gene Location: 884008-884484 bp Feature: domain Description: PHA02517 Location: 884011-884476 bp Feature: domain Description: PHA02 517 Location: 884011-884476 bp Feature: gene Location: 884518-885696 bp Feature: gene Location: 3287532-3287732 bp Feature: gene Location: 3287829-3288023 bp Ori: ASG50525.1 Feature: domain Description: PHA02517 Location: 3287832-3287988 bp Feature: domain Description: PHA02 517 Location: 32 87832 -32 87988 bp Feature: gene Location: 3288152-3289675 bp Ori: ASG50526.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3288425-3289157 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32 8842 5-32 89157 bp Feature: domain Description: GIIM Note: maturase Location: 3289232-3289430 bp Feature: domain Description: GIIM Note: maturase Location: 32 892 32 -32 89430 bp Feature: gene Location: 3289746-3290054 bp Feature: gene Location: 3289969-3290340 bp Feature: gene Location: 4159680-4160555 bp Ori: ASG51323.1 Feature: domain Description: YeeP Location: 4159695-4160553 bp Feature: domain Description: YeeP Location: 4159695-4160553 bp Feature: gene Location: 4160781-4161023 bp Feature: gene Location: 4161013-4161295 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4161022-4161109 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 416102 2 -4161109 bp Feature: gene Location: 4161584-4161763 bp Ori: ASG51324.1 Feature: domain Description: HTH_17 Location: 4161602-4161746 bp Feature: domain Description: HTH_17 Location: 4161602 -4161746 bp Feature: gene Location: 4161778-4165044 bp Ori: ASG51325.1 Feature: domain Description: PLDc_N_DEXD_c Location: 4161793-4162204 bp Feature: domain Description: PLDc_N_DEXD_c Location: 4161793-4162 2 04 bp Feature: domain Description: DEXDc_RapA Location: 4162465-4163032 bp Feature: domain Description: DEXDc_RapA Location: 4162 465-4163032 bp Feature: domain Description: SF2_C_SNF Location: 4163611-4164205 bp Feature: domain Description: SF2 _C_SNF Location: 4163611-41642 05 bp Feature: gene Location: 4261972-4262172 bp Feature: gene Location: 4262269-4262517 bp Ori: ASG51408.1 Feature: domain Description: PHA02517 Location: 4262278-4262482 bp Feature: domain Description: PHA02 517 Location: 42 62 2 78-42 62 482 bp Feature: gene Location: 4262592-4264115 bp Ori: ASG51409.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4262865-4263597 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 42 62 865-42 63597 bp Feature: domain Description: GIIM Note: maturase Location: 4263672-4263870 bp Feature: domain Description: GIIM Note: maturase Location: 42 63672 -42 63870 bp Feature: gene Location: 4264186-4264494 bp Feature: gene Location: 4264409-4264846 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PRK11114 (cellulose biosynthesis cyclic di-GMP-binding regulatory protein BcsB), PRK11097 (cellulase), PHA02517 (putative transposase OrfB; Reviewed), YeeP (COG3596), HTH_17 (pfam12728), PLDc_N_DEXD_c (cd10311), DEXDc_RapA (cd18011), SF2_C_SNF (cd18793)