myRT

myRT report for GCA_002211905.1_ASM221190v1

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Seq: CP022127.1 Klebsiella pneumoniae strain DHQP1605752_NV chromosome, complete genome (5377031 bp)
Overview 1 RT 1: 3274559-3281907 bp Neighborhood of RT #1 [3274559, 3281957] FimC FimD RVT-UG4 Integrase_1 PRK09692 Feature: gene Location: 3274559-3275323 bp Ori: ASG60162.1 Feature: domain Description: FimC Location: 3274604-3275306 bp Feature: domain Description: FimC Location: 3274604-3275306 bp Feature: gene Location: 3275370-3277964 bp Ori: ASG60163.1 Feature: domain Description: FimD Location: 3275412-3277953 bp Feature: domain Description: FimD Location: 327541 2-3277953 bp Feature: gene Location: 3277961-3280042 bp Ori: ASG60164.1 Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 3278372-3278816 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 3278372-327881 6 bp Feature: gene Location: 3280084-3280539 bp Ori: ASG60165.1 Feature: domain Description: Integrase_1 Location: 3280087-3280321 bp Feature: domain Description: Integrase_1 Location: 3280087-3280321 bp Feature: gene Location: 3280719-3281957 bp Feature: domain Description: PRK09692 Location: 3280725-3281907 bp Feature: domain Description: PRK09692 Location: 3280725-3281 907 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FimC (COG3121), FimD (COG3188), RVT-UG4, Integrase_1 (pfam12835), PRK09692 (Integrase; provisional)

Seq: CP022125.1 Klebsiella pneumoniae strain DHQP1605752_NV plasmid p1605752FIB, complete sequence (187721 bp)
Overview 1 RT 1: 11546-14794 bp Neighborhood of RT #1 [11546, 14808] RVT-GII PRK10276 Feature: gene Location: 11546-11727 bp Feature: gene Location: 12029-12259 bp Feature: gene Location: 12493-13977 bp Ori: ASG56881.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12895-13585 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12 895-13585 bp Feature: gene Location: 13977-14228 bp Feature: gene Location: 14383-14808 bp Ori: ASG56883.1 Feature: domain Description: PRK10276 Location: 14386-14794 bp Feature: domain Description: PRK102 76 Location: 14386-14794 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)