myRT

myRT report for GCA_002211985.1_ASM221198v1

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Seq: CP022102.1 Vibrio anguillarum strain JLL237 chromosome 2, complete sequence (1164167 bp)
Overview 1 RT 1: 886881-891614 bp Neighborhood of RT #1 [886881, 891670] AraC RVT-GII LysR PTDH Feature: gene Location: 886881-888032 bp Ori: ASG05780.1 Feature: domain Description: AraC Location: 887682-887994 bp Feature: domain Description: AraC Location: 887682-887994 bp Feature: gene Location: 888237-888827 bp Feature: gene Location: 889046-889891 bp Ori: ASG05782.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 889247-889838 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 889247-889838 bp Feature: gene Location: 889806-890666 bp Ori: ASG05783.1 Feature: domain Description: LysR Location: 889815-890658 bp Feature: domain Description: LysR Location: 88981 5-890658 bp Feature: gene Location: 890660-891670 bp Ori: ASG05784.1 Feature: domain Description: PTDH Location: 890666-891614 bp Feature: domain Description: PTDH Location: 890666-891 61 4 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AraC (COG2207), RVT-GII, LysR (COG0583), PTDH (cd12157)

Seq: CP022101.1 Vibrio anguillarum strain JLL237 chromosome 1, complete sequence (3122822 bp)
Overview 1 RT 1: 46133-52823 bp 2 RT 2: 3057530-3062435 bp Neighborhood of RT #1 [46133, 52840] APT Aerolysin RVT_N RVT-GII GIIM PRK09862 Neighborhood of RT #2 [3057530, 3062497] HTH_XRE RVT_N RVT-GII AAA_13 Feature: gene Location: 46133-46423 bp Feature: gene Location: 47645-49171 bp Ori: ASG02384.1 Feature: domain Description: APT Location: 47795-48014 bp Feature: domain Description: APT Location: 47795-48014 bp Feature: domain Description: Aerolysin Location: 48071-49142 bp Feature: domain Description: Aerolysin Location: 48071-49142 bp Feature: gene Location: 50263-51735 bp Ori: ASG02385.1 Gene: ltrA Feature: domain Description: RVT_N Location: 50311-50554 bp Feature: domain Description: RVT_N Location: 50311-50554 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 50599-51226 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 50599-512 2 6 bp Feature: domain Description: GIIM Note: maturase Location: 51286-51511 bp Feature: domain Description: GIIM Note: maturase Location: 512 86-51511 bp Feature: gene Location: 51651-51848 bp Feature: gene Location: 52226-52840 bp Ori: ASG02386.1 Feature: domain Description: PRK09862 Location: 52229-52823 bp Feature: domain Description: PRK09862 Location: 52 2 2 9-52 82 3 bp Feature: gene Location: 3057530-3057847 bp Ori: ASG04907.1 Feature: domain Description: HTH_XRE Location: 3057560-3057737 bp Feature: domain Description: HTH_XRE Location: 3057560-3057737 bp Feature: gene Location: 3057874-3058050 bp Feature: gene Location: 3058371-3058994 bp Feature: domain Description: RVT_N Location: 3058419-3058662 bp Feature: domain Description: RVT_N Location: 3058419-3058662 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3058707-3058983 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3058707-3058983 bp Feature: gene Location: 3059934-3060176 bp Feature: gene Location: 3060182-3062497 bp Ori: ASG04909.1 Feature: domain Description: AAA_13 Location: 3060224-3062435 bp Feature: domain Description: AAA_13 Location: 30602 2 4-3062 435 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT APT (pfam03440), Aerolysin (smart00999), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), PRK09862 (ATP-dependent protease), HTH_XRE (smart00530), AAA_13 (pfam13166)