myRT

myRT report for GCA_002212025.1_ASM221202v1

Download annotations/find similar RTs

Seq: CP022103.1 Vibrio anguillarum strain CNEVA NB11008 chromosome 1, complete sequence (3132527 bp)
Overview 1 RT 1: 183554-188169 bp 2 RT 2: 398591-405300 bp Neighborhood of RT #1 [183554, 188169] PinE RVT_N RVT-GII GIIM Neighborhood of RT #2 [398591, 405300] TnpB_IS66 LZ_Tnp_IS66 zf-IS66 DDE_Tnp_IS66 DDE_Tnp_IS66_C RVT-Retrons Feature: gene Location: 183554-184120 bp Ori: ASG06225.1 Feature: domain Description: PinE Location: 183557-184109 bp Feature: domain Description: PinE Location: 1 83557-1 841 09 bp Feature: gene Location: 184189-184386 bp Feature: gene Location: 184302-185774 bp Ori: ASG06226.1 Gene: ltrA Feature: domain Description: RVT_N Location: 184350-184593 bp Feature: domain Description: RVT_N Location: 1 84350-1 84593 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 184638-185265 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 84638-1 85265 bp Feature: domain Description: GIIM Note: maturase Location: 185328-185550 bp Feature: domain Description: GIIM Note: maturase Location: 1 85328-1 85550 bp Feature: gene Location: 186707-187753 bp Feature: gene Location: 187756-188169 bp Feature: gene Location: 398591-398944 bp Ori: ASG06387.1 Feature: domain Description: TnpB_IS66 Location: 398618-398900 bp Feature: domain Description: TnpB_IS66 Location: 39861 8-398900 bp Feature: gene Location: 399004-400530 bp Ori: ASG06388.1 Feature: domain Description: LZ_Tnp_IS66 Location: 399118-399319 bp Feature: domain Description: LZ_Tnp_IS66 Location: 3991 1 8-39931 9 bp Feature: domain Description: zf-IS66 Location: 399346-399478 bp Feature: domain Description: zf-IS66 Location: 399346-399478 bp Feature: domain Description: DDE_Tnp_IS66 Location: 399538-400387 bp Feature: domain Description: DDE_Tnp_IS66 Location: 399538-400387 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 400408-400516 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 400408-40051 6 bp Feature: gene Location: 401737-403497 bp Ori: ASG06389.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 401896-402514 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 401 896-40251 4 bp Feature: gene Location: 403807-404730 bp Feature: gene Location: 405205-405300 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PinE (COG1961), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), TnpB_IS66 (pfam05717), LZ_Tnp_IS66 (pfam13007), zf-IS66 (pfam13005), DDE_Tnp_IS66 (pfam03050), DDE_Tnp_IS66_C (pfam13817), RVT-Retrons