myRT

myRT report for GCA_002214725.1_ASM221472v1

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Seq: CP016317.1 Bacillus cereus strain M3 plasmid pBCM301, complete sequence (229356 bp)
Overview 1 RT 1: 83070-94686 bp 2 RT 2: 114616-119848 bp Neighborhood of RT #1 [83070, 94686] HepA RVT-GII HNHc DEXDc MTS RVT-GII HNHc Neighborhood of RT #2 [114616, 119848] beta_clamp RVT-GII COG4712 Feature: gene Location: 83070-83783 bp Feature: gene Location: 83800-85449 bp Feature: domain Description: HepA Location: 84661-84895 bp Feature: domain Description: HepA Location: 84661 -84895 bp Feature: gene Location: 85543-87342 bp Ori: ASI80968.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 85846-86548 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 85846-86548 bp Feature: domain Description: HNHc Note: nucleases Location: 87073-87223 bp Feature: domain Description: HNHc Note: nucleases Location: 87073-87223 bp Feature: gene Location: 88043-89722 bp Ori: ASI80969.1 Feature: domain Description: DEXDc Location: 88823-89696 bp Feature: domain Description: DEXDc Location: 88823-89696 bp Feature: gene Location: 89794-90021 bp Feature: gene Location: 90037-91158 bp Ori: ASI80971.1 Feature: domain Description: MTS Location: 90133-90496 bp Feature: domain Description: MTS Location: 901 33-90496 bp Feature: gene Location: 91303-93231 bp Ori: ASI80972.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 91624-92359 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 91 624-92359 bp Feature: domain Description: HNHc Note: nucleases Location: 92950-93115 bp Feature: domain Description: HNHc Note: nucleases Location: 92950-931 1 5 bp Feature: gene Location: 93488-93667 bp Feature: gene Location: 94273-94686 bp Feature: gene Location: 114616-115728 bp Ori: ASI80993.1 Feature: domain Description: beta_clamp Location: 114619-115723 bp Feature: domain Description: beta_clamp Location: 1 1 461 9-1 1 5723 bp Feature: gene Location: 115809-116336 bp Feature: gene Location: 116414-118315 bp Ori: ASI80995.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 116732-117434 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 6732-1 1 7434 bp Feature: gene Location: 119074-119430 bp Ori: ASI80996.1 Feature: domain Description: COG4712 Location: 119083-119425 bp Feature: domain Description: COG471 2 Location: 1 1 9083-1 1 9425 bp Feature: gene Location: 119453-119848 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HepA (COG0553), RVT-GII, HNHc (smart00507), DEXDc (smart00487), MTS (pfam05175), beta_clamp (cl29549), COG4712 (Uncharacterized protein )

Seq: CP016316.1 Bacillus cereus strain M3, complete sequence (5218997 bp)
Overview 1 RT 1: 2954657-2961476 bp 2 RT 2: 3433803-3445031 bp 3 RT 3: 4172678-4179225 bp Neighborhood of RT #1 [2954657, 2961535] YkvA SalY RVT-GII LolE LolD Neighborhood of RT #2 [3433803, 3445031] B_ant_repeat B_ant_repeat B_ant_repeat B_ant_repeat B_ant_repeat B_ant_repeat B_ant_repeat B_ant_repeat B_ant_repeat B_ant_repeat B_ant_repeat B_ant_repeat B_ant_repeat B_ant_repeat B_ant_repeat B_ant_repeat RVT-GII HNHc Neighborhood of RT #3 [4172678, 4179233] PRK02304 recJ ssDNA-exonuc_C RVT-GII HNHc recJ FieF Feature: gene Location: 2954657-2954992 bp Ori: ASI78523.1 Feature: domain Description: YkvA Location: 2954660-2954870 bp Feature: domain Description: YkvA Location: 2 954660-2 954870 bp Feature: gene Location: 2955473-2956603 bp Feature: domain Description: SalY Location: 2955515-2956592 bp Feature: domain Description: SalY Location: 2 955515-2 956592 bp Feature: gene Location: 2956664-2958565 bp Ori: ASI78524.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2956982-2957684 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 956982 -2 957684 bp Feature: gene Location: 2959329-2960798 bp Feature: domain Description: LolE Location: 2959350-2960466 bp Feature: domain Description: LolE Location: 2 959350-2 960466 bp Feature: gene Location: 2960789-2961535 bp Ori: ASI78525.1 Feature: domain Description: LolD Location: 2960813-2961476 bp Feature: domain Description: LolD Location: 2 960813-2 961476 bp Feature: gene Location: 3433803-3434873 bp Feature: gene Location: 3435149-3441514 bp Ori: ASI78982.1 Feature: domain Description: B_ant_repeat Location: 3435158-3435293 bp Feature: domain Description: B_ant_repeat Location: 3435158-34352 93 bp Feature: domain Description: B_ant_repeat Location: 3435533-3435686 bp Feature: domain Description: B_ant_repeat Location: 3435533-3435686 bp Feature: domain Description: B_ant_repeat Location: 3435923-3436076 bp Feature: domain Description: B_ant_repeat Location: 343592 3-3436076 bp Feature: domain Description: B_ant_repeat Location: 3436316-3436469 bp Feature: domain Description: B_ant_repeat Location: 3436316-3436469 bp Feature: domain Description: B_ant_repeat Location: 3436712-3436868 bp Feature: domain Description: B_ant_repeat Location: 3436712 -3436868 bp Feature: domain Description: B_ant_repeat Location: 3437108-3437264 bp Feature: domain Description: B_ant_repeat Location: 3437108-34372 64 bp Feature: domain Description: B_ant_repeat Location: 3437504-3437660 bp Feature: domain Description: B_ant_repeat Location: 3437504-3437660 bp Feature: domain Description: B_ant_repeat Location: 3437900-3438053 bp Feature: domain Description: B_ant_repeat Location: 3437900-3438053 bp Feature: domain Description: B_ant_repeat Location: 3438296-3438452 bp Feature: domain Description: B_ant_repeat Location: 34382 96-3438452 bp Feature: domain Description: B_ant_repeat Location: 3438692-3438848 bp Feature: domain Description: B_ant_repeat Location: 3438692 -3438848 bp Feature: domain Description: B_ant_repeat Location: 3439088-3439244 bp Feature: domain Description: B_ant_repeat Location: 3439088-34392 44 bp Feature: domain Description: B_ant_repeat Location: 3439484-3439637 bp Feature: domain Description: B_ant_repeat Location: 3439484-3439637 bp Feature: domain Description: B_ant_repeat Location: 3439880-3440033 bp Feature: domain Description: B_ant_repeat Location: 3439880-3440033 bp Feature: domain Description: B_ant_repeat Location: 3440276-3440432 bp Feature: domain Description: B_ant_repeat Location: 34402 76-3440432 bp Feature: domain Description: B_ant_repeat Location: 3440672-3440828 bp Feature: domain Description: B_ant_repeat Location: 3440672 -344082 8 bp Feature: domain Description: B_ant_repeat Location: 3441068-3441224 bp Feature: domain Description: B_ant_repeat Location: 3441068-34412 2 4 bp Feature: gene Location: 3441683-3443611 bp Ori: ASI78983.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3442004-3442739 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3442 004-3442 739 bp Feature: domain Description: HNHc Note: nucleases Location: 3443330-3443495 bp Feature: domain Description: HNHc Note: nucleases Location: 3443330-3443495 bp Feature: gene Location: 3443868-3444047 bp Feature: gene Location: 3444618-3445031 bp Feature: gene Location: 4172678-4173190 bp Ori: ASI79725.1 Feature: domain Description: PRK02304 Location: 4172681-4173185 bp Feature: domain Description: PRK02 304 Location: 4172 681-4173185 bp Feature: gene Location: 4173238-4175307 bp Feature: domain Description: recJ Location: 4173244-4174654 bp Feature: domain Description: recJ Location: 41732 44-4174654 bp Feature: domain Description: ssDNA-exonuc_C Location: 4174672-4175266 bp Feature: domain Description: ssDNA-exonuc_C Location: 4174672 -41752 66 bp Feature: gene Location: 4175408-4177234 bp Ori: ASI79726.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4175699-4176404 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4175699-4176404 bp Feature: domain Description: HNHc Note: nucleases Location: 4176974-4177112 bp Feature: domain Description: HNHc Note: nucleases Location: 4176974-4177112 bp Feature: gene Location: 4177954-4178238 bp Ori: ASI79727.1 Feature: domain Description: recJ Location: 4178041-4178224 bp Feature: domain Description: recJ Location: 4178041-41782 2 4 bp Feature: gene Location: 4178340-4179233 bp Ori: ASI80866.1 Feature: domain Description: FieF Location: 4178343-4179225 bp Feature: domain Description: FieF Location: 4178343-41792 2 5 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YkvA (COG3339), SalY (COG0577), RVT-GII, LolE (COG4591), LolD (COG1136), B_ant_repeat (TIGR01451), HNHc (smart00507), PRK02304 (adenine phosphoribosyltransferase; Provisional), recJ (TIGR00644), ssDNA-exonuc_C (pfam10141)
FieF (COG0053)