myRT

myRT report for GCA_002215195.1_ASM221519v1

Download annotations/find similar RTs

Seq: CP019584.1 Sinorhizobium meliloti strain CCMM B554 (FSM-MA), complete genome (3641423 bp)
Overview 1 RT 1: 473675-478461 bp 2 RT 2: 1068049-1071808 bp 3 RT 3: 1405195-1410062 bp Neighborhood of RT #1 [473675, 478466] PEP_mutase COG3415 RVT-GII GIIM COG3335 PRK00942 Neighborhood of RT #2 [1068049, 1071852] YcgN COG3415 RVT-GII GIIM COG3335 YjbR Neighborhood of RT #3 [1405195, 1410062] PRK08960 COG3415 RVT-GII GIIM COG3335 Feature: gene Location: 473675-474445 bp Ori: ASJ58113.1 Feature: domain Description: PEP_mutase Location: 473705-474431 bp Feature: domain Description: PEP_mutase Location: 473705-474431 bp Feature: gene Location: 474680-475087 bp Feature: domain Description: COG3415 Location: 474683-475085 bp Feature: domain Description: COG341 5 Location: 474683-475085 bp Feature: gene Location: 475682-476941 bp Ori: ASJ58114.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 475898-476552 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 475898-476552 bp Feature: domain Description: GIIM Note: maturase Location: 476633-476855 bp Feature: domain Description: GIIM Note: maturase Location: 476633-476855 bp Feature: gene Location: 476992-477510 bp Ori: ASJ58115.1 Feature: domain Description: COG3335 Location: 477115-477499 bp Feature: domain Description: COG3335 Location: 4771 1 5-477499 bp Feature: gene Location: 477579-478466 bp Ori: ASJ58116.1 Feature: domain Description: PRK00942 Location: 477597-478461 bp Feature: domain Description: PRK00942 Location: 477597-478461 bp Feature: gene Location: 1068049-1068516 bp Ori: ASJ58628.1 Feature: domain Description: YcgN Location: 1068055-1068490 bp Feature: domain Description: YcgN Location: 1 068055-1 068490 bp Feature: gene Location: 1068609-1069016 bp Feature: domain Description: COG3415 Location: 1068612-1069014 bp Feature: domain Description: COG341 5 Location: 1 06861 2-1 06901 4 bp Feature: gene Location: 1069611-1070870 bp Ori: ASJ58629.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1069827-1070481 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 069827-1 070481 bp Feature: domain Description: GIIM Note: maturase Location: 1070562-1070784 bp Feature: domain Description: GIIM Note: maturase Location: 1 070562-1 070784 bp Feature: gene Location: 1070921-1071439 bp Ori: ASJ58630.1 Feature: domain Description: COG3335 Location: 1071044-1071428 bp Feature: domain Description: COG3335 Location: 1 071 044-1 071 428 bp Feature: gene Location: 1071517-1071852 bp Ori: ASJ58631.1 Feature: domain Description: YjbR Location: 1071550-1071808 bp Feature: domain Description: YjbR Location: 1 071 550-1 071 808 bp Feature: gene Location: 1405195-1406352 bp Ori: ASJ58930.1 Feature: domain Description: PRK08960 Location: 1405207-1406347 bp Feature: domain Description: PRK08960 Location: 1 405207-1 406347 bp Feature: gene Location: 1406445-1406852 bp Feature: domain Description: COG3415 Location: 1406448-1406850 bp Feature: domain Description: COG341 5 Location: 1 406448-1 406850 bp Feature: gene Location: 1407447-1408706 bp Ori: ASJ58931.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1407663-1408317 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 407663-1 40831 7 bp Feature: domain Description: GIIM Note: maturase Location: 1408398-1408620 bp Feature: domain Description: GIIM Note: maturase Location: 1 408398-1 408620 bp Feature: gene Location: 1408757-1409275 bp Ori: ASJ58932.1 Feature: domain Description: COG3335 Location: 1408880-1409264 bp Feature: domain Description: COG3335 Location: 1 408880-1 409264 bp Feature: gene Location: 1409847-1410062 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PEP_mutase (TIGR02320), COG3415 (Transposase ), RVT-GII, GIIM (pfam08388), COG3335 (Transposase ), PRK00942 (acetylglutamate kinase; Provisional), YcgN (COG2983), YjbR (pfam04237), PRK08960 (pyridoxal phosphate-dependent aminotransferase)

Seq: CP019586.1 Sinorhizobium meliloti strain CCMM B554 (FSM-MA) plasmid pSymB, complete sequence (1639840 bp)
Overview 1 RT 1: 597571-601163 bp 2 RT 2: 878978-884941 bp 3 RT 3: 1362513-1365455 bp 4 RT 4: 1433780-1437635 bp Neighborhood of RT #1 [597571, 601249] IS285 IS285 COG3415 RVT-GII GIIM DDE_3 Neighborhood of RT #2 [878978, 884964] hutH PRK09356 RVT-GII AraJ Neighborhood of RT #3 [1362513, 1365455] MazF MazF RVT-GII GIIM Neighborhood of RT #4 [1433780, 1437679] COG3335 RVT-GII GIIM COG3415 PBP1_sensor_kinase_like Feature: gene Location: 597571-598147 bp Feature: domain Description: IS285 Location: 597577-597838 bp Feature: domain Description: IS2 85 Location: 597577-597838 bp Feature: domain Description: IS285 Location: 597838-598066 bp Feature: domain Description: IS2 85 Location: 597838-598066 bp Feature: gene Location: 598419-598909 bp Feature: domain Description: COG3415 Location: 598428-598779 bp Feature: domain Description: COG3415 Location: 59842 8-598779 bp Feature: gene Location: 599421-600680 bp Ori: ASJ62926.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 599637-600291 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 599637-6002 91 bp Feature: domain Description: GIIM Note: maturase Location: 600372-600594 bp Feature: domain Description: GIIM Note: maturase Location: 600372 -600594 bp Feature: gene Location: 600575-600841 bp Feature: gene Location: 600764-601249 bp Feature: domain Description: DDE_3 Location: 600770-601163 bp Feature: domain Description: DDE_3 Location: 600770-601163 bp Feature: gene Location: 878978-880513 bp Ori: ASJ63148.1 Feature: domain Description: hutH Location: 878987-880502 bp Feature: domain Description: hutH Location: 878987-880502 bp Feature: gene Location: 880510-881880 bp Ori: ASJ63149.1 Feature: domain Description: PRK09356 Location: 880669-881872 bp Feature: domain Description: PRK09356 Location: 880669-881872 bp Feature: gene Location: 881959-883132 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 882103-882325 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 882 103-882 32 5 bp Feature: gene Location: 883148-883741 bp Feature: gene Location: 883780-884964 bp Ori: ASJ63150.1 Feature: domain Description: AraJ Location: 883783-884941 bp Feature: domain Description: AraJ Location: 883783-884941 bp Feature: gene Location: 1362513-1362716 bp Ori: ASJ63560.1 Feature: domain Description: MazF Location: 1362516-1362627 bp Feature: domain Description: MazF Location: 1362 516-1362 62 7 bp Feature: gene Location: 1362716-1363063 bp Ori: ASJ63561.1 Feature: domain Description: MazF Location: 1362719-1363052 bp Feature: domain Description: MazF Location: 1362 719-1363052 bp Feature: gene Location: 1363016-1364218 bp Ori: ASJ63562.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1363181-1363799 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1363181-1363799 bp Feature: domain Description: GIIM Note: maturase Location: 1363853-1364069 bp Feature: domain Description: GIIM Note: maturase Location: 1363853-1364069 bp Feature: gene Location: 1364213-1364836 bp Feature: gene Location: 1365153-1365455 bp Feature: gene Location: 1433780-1434178 bp Ori: ASJ63624.1 Feature: domain Description: COG3335 Location: 1433783-1434167 bp Feature: domain Description: COG3335 Location: 1433783-1434167 bp Feature: gene Location: 1434160-1434453 bp Feature: gene Location: 1434348-1435607 bp Ori: ASJ63625.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1434564-1435218 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1434564-14352 18 bp Feature: domain Description: GIIM Note: maturase Location: 1435299-1435521 bp Feature: domain Description: GIIM Note: maturase Location: 14352 99-143552 1 bp Feature: gene Location: 1436202-1436609 bp Feature: domain Description: COG3415 Location: 1436205-1436607 bp Feature: domain Description: COG3415 Location: 14362 05-1436607 bp Feature: gene Location: 1436711-1437679 bp Ori: ASJ63626.1 Feature: domain Description: PBP1_sensor_kinase_like Location: 1436819-1437635 bp Feature: domain Description: PBP1_sensor_kinase_like Location: 1436819-1437635 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT IS285 (COG3328), COG3415 (Transposase ), RVT-GII, GIIM (pfam08388), DDE_3 (pfam13358), hutH (TIGR01225), PRK09356 (imidazolonepropionase; Validated), AraJ (COG2814), MazF (COG2337), COG3335 (Transposase )
PBP1_sensor_kinase_like

Seq: CP019585.1 Sinorhizobium meliloti strain CCMM B554 (FSM-MA) plasmid pSymA, complete sequence (1422736 bp)
Overview 1 RT 1: 813251-816696 bp Neighborhood of RT #1 [813251, 816696] ParD COG3335 RVT-GII GIIM COG3415 Feature: gene Location: 813251-813526 bp Ori: ASJ61811.1 Feature: domain Description: ParD Location: 813257-813506 bp Feature: domain Description: ParD Location: 813 257-813 506 bp Feature: gene Location: 813662-814180 bp Ori: ASJ61812.1 Feature: domain Description: COG3335 Location: 813785-814169 bp Feature: domain Description: COG3 3 3 5 Location: 813 785-814169 bp Feature: gene Location: 814231-815490 bp Ori: ASJ61813.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 814447-815101 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 814447-815101 bp Feature: domain Description: GIIM Note: maturase Location: 815182-815404 bp Feature: domain Description: GIIM Note: maturase Location: 815182-815404 bp Feature: gene Location: 816085-816492 bp Feature: domain Description: COG3415 Location: 816088-816490 bp Feature: domain Description: COG3 415 Location: 816088-816490 bp Feature: gene Location: 816508-816696 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ParD (pfam09386), COG3335 (Transposase ), RVT-GII, GIIM (pfam08388), COG3415 (Transposase )