myRT

myRT report for GCA_002220265.1_ASM222026v1

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Seq: CP018626.1 Escherichia coli strain FORC_044 plasmid pFORC44_2, complete sequence (107692 bp)
Overview 1 RT 1: 26702-33909 bp Neighborhood of RT #1 [26702, 33911] PRK13705 PRK13698 RVT_N RVT-GII YkfC HNHc DUF1281 DUF1281_C PRK13699 Feature: gene Location: 26702-27868 bp Ori: ASL56656.1 Feature: domain Description: PRK13705 Location: 26705-27866 bp Feature: domain Description: PRK1 3705 Location: 26705-27866 bp Feature: gene Location: 27868-28839 bp Ori: ASL56657.1 Feature: domain Description: PRK13698 Location: 27871-28834 bp Feature: domain Description: PRK1 3698 Location: 27871 -28834 bp Feature: gene Location: 30139-31863 bp Ori: ASL56658.1 Feature: domain Description: RVT_N Location: 30196-30433 bp Feature: domain Description: RVT_N Location: 301 96-30433 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 30484-31132 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 30484-31 1 32 bp Feature: domain Description: YkfC Location: 31264-31420 bp Feature: domain Description: YkfC Location: 31 264-31 420 bp Feature: domain Description: HNHc Note: nucleases Location: 31648-31807 bp Feature: domain Description: HNHc Note: nucleases Location: 31 648-31 807 bp Feature: gene Location: 31940-32842 bp Ori: ASL56659.1 Feature: domain Description: DUF1281 Location: 32009-32537 bp Feature: domain Description: DUF1 281 Location: 32009-32537 bp Feature: domain Description: DUF1281_C Location: 32543-32771 bp Feature: domain Description: DUF1 281 _C Location: 32543-32771 bp Feature: gene Location: 33228-33911 bp Ori: ASL56660.1 Feature: domain Description: PRK13699 Location: 33231-33909 bp Feature: domain Description: PRK1 3699 Location: 33231 -33909 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK13705 (plasmid-partitioning protein SopA; Provisional), PRK13698 (ParB/RepB/Spo0J family plasmid partition protein), RVT_N (pfam13655), RVT-GII, YkfC (COG3344), HNHc (smart00507), DUF1281 (pfam06924), DUF1281_C (pfam18406), PRK13699 (putative methylase; Provisional)