myRT

myRT report for GCA_002222595.2_ASM222259v2

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Seq: CP022413.2 Blautia hansenii DSM 20583 chromosome, complete genome (3065949 bp)
Overview 1 RT 1: 708103-711378 bp 2 RT 2: 806342-809869 bp 3 RT 3: 1272416-1278272 bp 4 RT 4: 1736473-1744285 bp 5 RT 5: 1901381-1906312 bp 6 RT 6: 1960641-1964858 bp 7 RT 7: 2901167-2906915 bp Neighborhood of RT #1 [708103, 711917] Phytochelatin_C RVT-DGRs Avd_like pfam03781 Neighborhood of RT #2 [806342, 809958] PHA00653 Avd_like RVT-DGRs Phage_holin_4_1 Neighborhood of RT #3 [1272416, 1278373] FadR rpsA RVT-GII GIIM HNHc Ga5DH-like_SDR_c DUF820 Neighborhood of RT #4 [1736473, 1744302] CcmA carB RVT-GII GIIM SurA_N_3 Lys_export Neighborhood of RT #5 [1901381, 1906312] GP88 RVT-UG27 Neighborhood of RT #6 [1960641, 1964890] HTH_XRE DNA_ligase_A_N RVT-GII MATE_MepA_like Neighborhood of RT #7 [2901167, 2906935] PRK05402 AcrR RVT-Retrons TatD_DNAse PerM Feature: gene Location: 708103-708483 bp Feature: gene Location: 708496-708852 bp Ori: ASM68633.1 Feature: domain Description: Phytochelatin_C Location: 708511-708691 bp Feature: domain Description: Phytochelatin_C Location: 70851 1 -708691 bp Feature: gene Location: 708831-710144 bp Ori: ASM68634.1 Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 709212-709878 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 70921 2-709878 bp Feature: gene Location: 710404-710748 bp Ori: ASM68635.1 Feature: domain Description: Avd_like Location: 710428-710740 bp Feature: domain Description: Avd_like Location: 71 0428-71 0740 bp Feature: gene Location: 710820-711917 bp Ori: ASM68636.1 Feature: domain Description: pfam03781 Location: 711060-711378 bp Feature: domain Description: pfam03781 Location: 71 1 060-71 1 378 bp Feature: gene Location: 806342-807484 bp Ori: ASM68753.1 Feature: domain Description: PHA00653 Location: 806465-807482 bp Feature: domain Description: PHA00653 Location: 806465-807482 bp Feature: gene Location: 807525-807881 bp Ori: ASM68754.1 Feature: domain Description: Avd_like Location: 807555-807858 bp Feature: domain Description: Avd_like Location: 807555-807858 bp Feature: gene Location: 808208-809269 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 808448-809066 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 808448-809066 bp Feature: gene Location: 809294-809473 bp Feature: gene Location: 809470-809958 bp Ori: ASM68756.1 Feature: domain Description: Phage_holin_4_1 Location: 809509-809869 bp Feature: domain Description: Phage_holin_4_1 Location: 809509-809869 bp Feature: gene Location: 1272416-1273084 bp Ori: ASM69148.1 Feature: domain Description: FadR Location: 1272431-1273073 bp Feature: domain Description: FadR Location: 1 272431 -1 273073 bp Feature: gene Location: 1273335-1273943 bp Feature: domain Description: rpsA Location: 1273347-1273941 bp Feature: domain Description: rpsA Location: 1 273347-1 273941 bp Feature: gene Location: 1274669-1276588 bp Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1275035-1275734 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 275035-1 275734 bp Feature: domain Description: GIIM Note: maturase Location: 1275803-1276022 bp Feature: domain Description: GIIM Note: maturase Location: 1 275803-1 276022 bp Feature: domain Description: HNHc Note: nucleases Location: 1276325-1276436 bp Feature: domain Description: HNHc Note: nucleases Location: 1 276325-1 276436 bp Feature: gene Location: 1276694-1277371 bp Ori: ASM69151.1 Feature: domain Description: Ga5DH-like_SDR_c Location: 1276700-1277366 bp Feature: domain Description: Ga5DH-like_SDR_c Location: 1 276700-1 277366 bp Feature: gene Location: 1277816-1278373 bp Ori: ASM69152.1 Feature: domain Description: DUF820 Location: 1277879-1278272 bp Feature: domain Description: DUF820 Location: 1 277879-1 278272 bp Feature: gene Location: 1736473-1737177 bp Ori: ASM69608.1 Feature: domain Description: CcmA Location: 1736476-1737154 bp Feature: domain Description: CcmA Location: 1 736476-1 7371 54 bp Feature: gene Location: 1737339-1740557 bp Ori: ASM69609.1 Feature: domain Description: carB Location: 1737342-1740543 bp Feature: domain Description: carB Location: 1 737342-1 740543 bp Feature: gene Location: 1740651-1742063 bp Ori: ASM69610.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1741002-1741623 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 741 002-1 741 623 bp Feature: domain Description: GIIM Note: maturase Location: 1741677-1741902 bp Feature: domain Description: GIIM Note: maturase Location: 1 741 677-1 741 902 bp Feature: gene Location: 1742536-1743501 bp Ori: ASM69611.1 Feature: domain Description: SurA_N_3 Location: 1743058-1743283 bp Feature: domain Description: SurA_N_3 Location: 1 743058-1 743283 bp Feature: gene Location: 1743700-1744302 bp Ori: ASM69612.1 Feature: domain Description: Lys_export Location: 1743718-1744285 bp Feature: domain Description: Lys_export Location: 1 74371 8-1 744285 bp Feature: gene Location: 1901381-1901983 bp Ori: ASM69785.1 Feature: domain Description: GP88 Location: 1901471-1901795 bp Feature: domain Description: GP88 Location: 1 901 471 -1 901 795 bp Feature: gene Location: 1901983-1903338 bp Feature: gene Location: 1903343-1904623 bp Ori: ASM69787.1 Feature: RT Description: RVT-UG27 Note: UG27 RT Location: 1903535-1904183 bp Feature: RT Description: RVT-UG27 Note: UG27 RT Location: 1 903535-1 9041 83 bp Feature: gene Location: 1904938-1905783 bp Feature: gene Location: 1905830-1906312 bp Feature: gene Location: 1960641-1960823 bp Feature: gene Location: 1960822-1961628 bp Ori: ASM69860.1 Feature: domain Description: HTH_XRE Location: 1960849-1961020 bp Feature: domain Description: HTH_XRE Location: 1 960849-1 961 020 bp Feature: domain Description: DNA_ligase_A_N Location: 1961353-1961599 bp Feature: domain Description: DNA_ligase_A_N Location: 1 961 353-1 961 599 bp Feature: gene Location: 1961803-1963098 bp Ori: ASM69861.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1962058-1962748 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 962058-1 962748 bp Feature: gene Location: 1963188-1963367 bp Feature: gene Location: 1963589-1964890 bp Ori: ASM69863.1 Feature: domain Description: MATE_MepA_like Location: 1963601-1964858 bp Feature: domain Description: MATE_MepA_like Location: 1 963601 -1 964858 bp Feature: gene Location: 2901167-2903071 bp Ori: ASM70613.1 Feature: domain Description: PRK05402 Location: 2901185-2903066 bp Feature: domain Description: PRK05402 Location: 2901 1 85-2903066 bp Feature: gene Location: 2903087-2903665 bp Ori: ASM70614.1 Feature: domain Description: AcrR Location: 2903096-2903486 bp Feature: domain Description: AcrR Location: 2903096-2903486 bp Feature: gene Location: 2903990-2904958 bp Ori: ASM70615.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2904152-2904710 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 29041 52-290471 0 bp Feature: gene Location: 2905042-2905806 bp Ori: ASM70616.1 Feature: domain Description: TatD_DNAse Location: 2905048-2905801 bp Feature: domain Description: TatD_DNAse Location: 2905048-2905801 bp Feature: gene Location: 2905796-2906935 bp Ori: ASM70617.1 Feature: domain Description: PerM Location: 2905862-2906915 bp Feature: domain Description: PerM Location: 2905862-290691 5 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Phytochelatin_C (pfam09328), RVT-DGRs, Avd_like (cd16376), pfam03781 (FGE-sulfatase;Sulfatase-modifying factor enzyme 1), PHA00653 (mtd;major tropism determinant), Phage_holin_4_1 (pfam05105), FadR (COG2186), rpsA (TIGR00717), RVT-GII, GIIM (pfam08388)
HNHc (smart00507), Ga5DH-like_SDR_c (cd05347), DUF820, CcmA (COG4133), carB (PRK12815), SurA_N_3 (pfam13624), Lys_export (pfam03956), GP88 (pfam17338), RVT-UG27, HTH_XRE (smart00530)
DNA_ligase_A_N (pfam04675), MATE_MepA_like (cd13143), PRK05402 (1,4-alpha-glucan branching protein GlgB), AcrR (COG1309), RVT-Retrons, TatD_DNAse (cd01310), PerM (COG0628)