myRT

myRT report for GCA_002223805.1_ASM222380v1

Download annotations/find similar RTs

Seq: CP019338.1 Pseudomonas aeruginosa strain L10 chromosome, complete genome (6661962 bp)
Overview 1 RT 1: 638213-646510 bp Neighborhood of RT #1 [638213, 646560] COG3177 RVT_N RVT-GII GIIM HNH PBP2_BvgS_HisK_like PRK09776 PAS PRK10060 Feature: gene Location: 638213-639334 bp Ori: ASM83442.1 Feature: domain Description: COG3177 Location: 638231-639323 bp Feature: domain Description: COG31 77 Location: 638231 -639323 bp Feature: gene Location: 639593-639729 bp Feature: gene Location: 640057-641742 bp Ori: ASM83443.1 Feature: domain Description: RVT_N Location: 640114-640354 bp Feature: domain Description: RVT_N Location: 6401 1 4-640354 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 640402-641038 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 640402-641 038 bp Feature: domain Description: GIIM Note: maturase Location: 641092-641323 bp Feature: domain Description: GIIM Note: maturase Location: 641 092-641 323 bp Feature: domain Description: HNH Note: nucleases Location: 641575-641713 bp Feature: domain Description: HNH Note: nucleases Location: 641 575-641 71 3 bp Feature: gene Location: 641937-642116 bp Feature: gene Location: 642823-646560 bp Ori: ASM83445.1 Feature: domain Description: PBP2_BvgS_HisK_like Location: 642931-643588 bp Feature: domain Description: PBP2_BvgS_HisK_like Location: 642931 -643588 bp Feature: domain Description: PRK09776 Location: 643801-644272 bp Feature: domain Description: PRK09776 Location: 643801 -644272 bp Feature: domain Description: PAS Location: 644317-644854 bp Feature: domain Description: PAS Location: 64431 7-644854 bp Feature: domain Description: PRK10060 Location: 644863-646510 bp Feature: domain Description: PRK1 0060 Location: 644863-64651 0 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3177 (Fic family protein ), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNH (pfam01844), PBP2_BvgS_HisK_like (cd01007), PRK09776 (putative diguanylate cyclase; Provisional), PAS (smart00091), PRK10060 (cyclic di-GMP phosphodiesterase)